Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:30091540-30281556

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit124.1 16 30092188 to 30092319 131 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 124.1
D16Mit124 16 30092343 to 30092477 134 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 124
Gm20040 16 30092482 to 30092882 400 - pseudogene predicted gene, 20040
Tssr137871 16 30093993 to 30093999 6 + TSS region transcription start site region 137871
Tssr137872 16 30139399 to 30139409 10 + TSS region transcription start site region 137872
Gm6029 16 30139459 to 30139829 370 + pseudogene predicted gene 6029
n-R5s32 16 30141843 to 30141945 102 - rRNA gene nuclear encoded rRNA 5S 32
Cpgi8153 16 30171756 to 30172048 292 CpG island CpG island 8153
Tssr140696 16 30185906 to 30185913 7 - TSS region transcription start site region 140696
Tssr140697 16 30186238 to 30186259 21 - TSS region transcription start site region 140697
Tssr137873 16 30186540 to 30186556 16 + TSS region transcription start site region 137873
Cpgi8154 16 30187908 to 30188302 394 CpG island CpG island 8154
Tssr140698 16 30187954 to 30187961 7 - TSS region transcription start site region 140698
Tssr137874 16 30190723 to 30190729 6 + TSS region transcription start site region 137874
1700025H01Rik 16 30195071 to 30200299 5228 + lincRNA gene RIKEN cDNA 1700025H01 gene
Tssr137875 16 30196119 to 30196124 5 + TSS region transcription start site region 137875
Tssr137876 16 30198114 to 30198137 23 + TSS region transcription start site region 137876
Gm26562 16 30200910 to 30205879 4969 - lincRNA gene predicted gene, 26562
D16Mit210 16 30213580 to 30213689 109 DNA segment DNA Segment, Chr 16 Massachusetts Institute of Technology 210
Cpgi8155 16 30236234 to 30236600 366 CpG island CpG island 8155
Gm33330 16 30249567 to 30253224 3657 - lncRNA gene predicted gene, 33330
Cpgi8156 16 30252004 to 30252424 420 CpG island CpG island 8156
Gm49645 16 30255152 to 30255542 390 + pseudogene predicted gene, 49645
Cpn2 16 30256378 to 30267499 11121 - protein coding gene carboxypeptidase N, polypeptide 2
Tssr140699 16 30258354 to 30258366 12 - TSS region transcription start site region 140699
Tssr137877 16 30259796 to 30259814 18 + TSS region transcription start site region 137877
Tssr140700 16 30260027 to 30260036 9 - TSS region transcription start site region 140700
Tssr140701 16 30260095 to 30260111 16 - TSS region transcription start site region 140701
Tssr140702 16 30260313 to 30260324 11 - TSS region transcription start site region 140702
Tssr140703 16 30260776 to 30260790 14 - TSS region transcription start site region 140703
Tssr140704 16 30267503 to 30267522 19 - TSS region transcription start site region 140704
Tssr140705 16 30267524 to 30267572 48 - TSS region transcription start site region 140705
Lrrc15 16 30269302 to 30283254 13952 - protein coding gene leucine rich repeat containing 15