Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:29598615-30088621

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opa1 16 29579334 to 29654884 75550 + protein coding gene OPA1, mitochondrial dynamin like GTPase
D630050H08Rik 16 29641378 to 29643447 2069 unclassified gene RIKEN cDNA D630050H08 gene
Tssr137851 16 29646436 to 29646440 4 + TSS region transcription start site region 137851
Gm49636 16 29750810 to 29754312 3502 - lincRNA gene predicted gene, 49636
Tssr140686 16 29788196 to 29788200 4 - TSS region transcription start site region 140686
9530020O07Rik 16 29809388 to 29814107 4719 protein coding gene RIKEN cDNA 9530020O07 gene
Gm26834 16 29811058 to 29837814 26756 + lincRNA gene predicted gene, 26834
Gm46567 16 29813447 to 29814642 1195 + protein coding gene predicted gene, 46567
Cpgi8145 16 29813539 to 29814468 929 CpG island CpG island 8145
Gm32679 16 29829456 to 29834728 5272 - lincRNA gene predicted gene, 32679
Tssr140687 16 29834722 to 29834736 14 - TSS region transcription start site region 140687
Cpgi8146 16 29839320 to 29839657 337 CpG island CpG island 8146
Tssr137852 16 29839349 to 29839385 36 + TSS region transcription start site region 137852
Tssr137853 16 29843615 to 29843621 6 + TSS region transcription start site region 137853
Tssr137854 16 29843874 to 29843923 49 + TSS region transcription start site region 137854
Tssr140688 16 29845723 to 29845769 46 - TSS region transcription start site region 140688
Tssr137855 16 29845957 to 29845966 9 + TSS region transcription start site region 137855
Tssr140689 16 29849607 to 29849621 14 - TSS region transcription start site region 140689
Tssr140690 16 29849629 to 29849645 16 - TSS region transcription start site region 140690
Gm32740 16 29860564 to 29867537 6973 + lncRNA gene predicted gene, 32740
Gm26569 16 29907519 to 29946754 39235 - lincRNA gene predicted gene, 26569
Cpgi8147 16 29945893 to 29946367 474 CpG island CpG island 8147
Tssr140691 16 29946499 to 29946532 33 - TSS region transcription start site region 140691
Gm1968 16 29957927 to 29979124 21197 - lincRNA gene predicted gene 1968
Gm32796 16 29972735 to 29981987 9252 + lncRNA gene predicted gene, 32796
Tssr140692 16 29998241 to 29998269 28 - TSS region transcription start site region 140692
Cpgi8148 16 30008303 to 30009365 1062 CpG island CpG island 8148
Tssr137856 16 30008657 to 30008672 15 + TSS region transcription start site region 137856
4632428C04Rik 16 30008667 to 30021430 12763 + lincRNA gene RIKEN cDNA 4632428C04 gene
Tssr137857 16 30008696 to 30008703 7 + TSS region transcription start site region 137857
Tssr137858 16 30010017 to 30010020 3 + TSS region transcription start site region 137858
9030404E10Rik 16 30021842 to 30039479 17637 - lincRNA gene RIKEN cDNA 9030404E10 gene
Tssr140693 16 30039302 to 30039313 11 - TSS region transcription start site region 140693
Tssr140694 16 30039319 to 30039334 15 - TSS region transcription start site region 140694
Tssr140695 16 30039338 to 30039364 26 - TSS region transcription start site region 140695
Tssr137859 16 30055627 to 30055636 9 + TSS region transcription start site region 137859
Tssr137860 16 30055715 to 30055720 5 + TSS region transcription start site region 137860
Cpgi8149 16 30063082 to 30064800 1718 CpG island CpG island 8149
Tssr137861 16 30064164 to 30064196 32 + TSS region transcription start site region 137861
Tssr137862 16 30064351 to 30064363 12 + TSS region transcription start site region 137862
Tssr137863 16 30064437 to 30064444 7 + TSS region transcription start site region 137863
Cpgi8150 16 30065070 to 30065354 284 CpG island CpG island 8150
Tssr137864 16 30065308 to 30065312 4 + TSS region transcription start site region 137864
Tssr137865 16 30065333 to 30065351 18 + TSS region transcription start site region 137865
Hes1 16 30065357 to 30067796 2439 + protein coding gene hes family bHLH transcription factor 1
Tssr137866 16 30065623 to 30065638 15 + TSS region transcription start site region 137866
Tssr137867 16 30065642 to 30065653 11 + TSS region transcription start site region 137867
Cpgi8151 16 30066013 to 30067465 1452 CpG island CpG island 8151
Tssr137868 16 30066413 to 30066432 19 + TSS region transcription start site region 137868
Tssr137869 16 30067019 to 30067030 11 + TSS region transcription start site region 137869
Tssr137870 16 30067127 to 30067145 18 + TSS region transcription start site region 137870
Gm32998 16 30067863 to 30070438 2575 - lncRNA gene predicted gene, 32998
Cpgi8152 16 30069881 to 30070971 1090 CpG island CpG island 8152