MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:29166851-29443732

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plaat1	16	29209695 to 29230531	20836	+	protein coding gene	phospholipase A and acyltransferase 1
Tssr137841	16	29209707 to 29209726	19	+	TSS region	transcription start site region 137841
Cpgi8142	16	29209741 to 29210519	778		CpG island	CpG island 8142
Tssr137842	16	29209780 to 29209791	11	+	TSS region	transcription start site region 137842
Tssr137843	16	29210109 to 29210153	44	+	TSS region	transcription start site region 137843
Tssr137844	16	29210156 to 29210202	46	+	TSS region	transcription start site region 137844
Atp13a5	16	29231851 to 29378732	146881	-	protein coding gene	ATPase type 13A5
Tssr140677	16	29233036 to 29233040	4	-	TSS region	transcription start site region 140677
Cpgi8143	16	29281414 to 29281623	209		CpG island	CpG island 8143
Gm15752	16	29283966 to 29284359	393	-	pseudogene	predicted gene 15752
Tssr140678	16	29378570 to 29378610	40	-	TSS region	transcription start site region 140678
Tssr140679	16	29378612 to 29378625	13	-	TSS region	transcription start site region 140679
Tssr140680	16	29378696 to 29378712	16	-	TSS region	transcription start site region 140680
Atp13a4	16	29395853 to 29544864	149011	-	protein coding gene	ATPase type 13A4
D16Mit57	16	29406542 to 29406653	111		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 57
Lrnx9	16	29406542 to 29406653	111		QTL	learning-contextual 9
Nilac10	16	29406653 to 7319042	-22087611		QTL	nicotine induced locomotor activity 10
Tssr140681	16	29441760 to 29441807	47	-	TSS region	transcription start site region 140681