Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:26849930-28926128

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gmnc 16 26957235 to 26991667 34432 - protein coding gene geminin coiled-coil domain containing
Cpgi8133 16 26967910 to 26968380 470 CpG island CpG island 8133
2610005G05Rik 16 26991894 to 26992572 678 unclassified gene RIKEN cDNA 2610005G05 gene
Obq35 16 27062881 to 27062881 0 QTL obesity QTL 35
D16Dcr3 16 27292551 to 27292646 95 DNA segment DNA Segment, Chr 16, Derry C. Roopenian 3
Tssr4834 16 27302882 to 27302883 1 + TSS region transcription start site region 4834
Tssr137819 16 27307632 to 27307650 18 + TSS region transcription start site region 137819
Ostn 16 27307641 to 27351209 43568 + protein coding gene osteocrin
Gm32312 16 27317944 to 27326641 8697 - antisense lncRNA gene predicted gene, 32312
Gm15970 16 27343114 to 27343943 829 - pseudogene predicted gene 15970
Tssr140642 16 27348439 to 27348470 31 - TSS region transcription start site region 140642
Uts2b 16 27353322 to 27370239 16917 - protein coding gene urotensin 2B
Tssr140643 16 27370214 to 27370217 3 - TSS region transcription start site region 140643
Cpgi8134 16 27388727 to 27389427 700 CpG island CpG island 8134
Tssr137820 16 27388755 to 27388758 3 + TSS region transcription start site region 137820
Tssr137821 16 27388848 to 27388859 11 + TSS region transcription start site region 137821
Ccdc50 16 27388869 to 27452218 63349 + protein coding gene coiled-coil domain containing 50
Tssr137822 16 27388949 to 27388966 17 + TSS region transcription start site region 137822
Tssr137823 16 27388972 to 27388998 26 + TSS region transcription start site region 137823
Tssr137824 16 27389004 to 27389031 27 + TSS region transcription start site region 137824
Tssr137825 16 27389034 to 27389089 55 + TSS region transcription start site region 137825
Tssr137826 16 27389097 to 27389111 14 + TSS region transcription start site region 137826
Tssr137827 16 27389911 to 27389943 32 + TSS region transcription start site region 137827
Tssr137828 16 27411073 to 27411084 11 + TSS region transcription start site region 137828
Tssr137829 16 27417172 to 27417193 21 + TSS region transcription start site region 137829
Tssr137830 16 27417218 to 27417233 15 + TSS region transcription start site region 137830
Tssr137831 16 27422769 to 27422785 16 + TSS region transcription start site region 137831
Tssr137832 16 27422925 to 27422967 42 + TSS region transcription start site region 137832
Tssr137833 16 27423059 to 27423099 40 + TSS region transcription start site region 137833
Tssr137834 16 27435058 to 27435066 8 + TSS region transcription start site region 137834
Tssr137835 16 27439630 to 27439644 14 + TSS region transcription start site region 137835
Tssr137836 16 27439816 to 27439835 19 + TSS region transcription start site region 137836
Tssr140644 16 27444570 to 27444616 46 - TSS region transcription start site region 140644
Tssr137837 16 27450387 to 27450393 6 + TSS region transcription start site region 137837
Gm32356 16 27467384 to 27474396 7012 + lncRNA gene predicted gene, 32356
Gm18234 16 27843362 to 27844412 1050 - pseudogene predicted gene, 18234
Tssr4835 16 27849828 to 27849849 21 + TSS region transcription start site region 4835
Tssr137838 16 27849873 to 27849903 30 + TSS region transcription start site region 137838
Gm10823 16 27849930 to 27926128 76198 + lincRNA gene predicted gene 10823
Gm49765 16 27970029 to 27970345 316 - pseudogene predicted gene, 49765
B230343J05Rik 16 28157782 to 28160031 2249 unclassified non-coding RNA gene RIKEN cDNA B230343J05 gene
Tssr140645 16 28159869 to 28159874 5 - TSS region transcription start site region 140645
Fgf12 16 28160098 to 28753068 592970 - protein coding gene fibroblast growth factor 12
Tssr140646 16 28219830 to 28219837 7 - TSS region transcription start site region 140646
Tssr140647 16 28274308 to 28274313 5 - TSS region transcription start site region 140647
Tssr140648 16 28307171 to 28307175 4 - TSS region transcription start site region 140648
Tssr140649 16 28323548 to 28323571 23 - TSS region transcription start site region 140649
Tssr140650 16 28422459 to 28422462 3 - TSS region transcription start site region 140650
Cpgi8135 16 28444887 to 28445503 616 CpG island CpG island 8135
Tssr140651 16 28445364 to 28445395 31 - TSS region transcription start site region 140651
Tssr140652 16 28445683 to 28445694 11 - TSS region transcription start site region 140652
Cpgi8136 16 28445831 to 28447436 1605 CpG island CpG island 8136
Tssr140653 16 28445849 to 28445867 18 - TSS region transcription start site region 140653
Tssr140654 16 28446523 to 28446541 18 - TSS region transcription start site region 140654
Tssr140655 16 28446778 to 28446834 56 - TSS region transcription start site region 140655
Tssr140656 16 28446987 to 28447010 23 - TSS region transcription start site region 140656
Tssr140657 16 28447017 to 28447033 16 - TSS region transcription start site region 140657
Tssr140658 16 28500158 to 28500162 4 - TSS region transcription start site region 140658
Cpgi8137 16 28564154 to 28565377 1223 CpG island CpG island 8137
Tssr140659 16 28564864 to 28564886 22 - TSS region transcription start site region 140659
Gm41437 16 28565050 to 28568877 3827 + lncRNA gene predicted gene, 41437
Cpgi8138 16 28593194 to 28593436 242 CpG island CpG island 8138
Mir690 16 28599935 to 28600043 108 - miRNA gene microRNA 690
Gm46548 16 28609057 to 28634237 25180 - lncRNA gene predicted gene, 46548
4931407J08Rik 16 28630554 to 28632028 1474 unclassified gene RIKEN cDNA 4931407J08 gene
Tssr140660 16 28640789 to 28640824 35 - TSS region transcription start site region 140660
Tssr140661 16 28641057 to 28641066 9 - TSS region transcription start site region 140661
D330005D02Rik 16 28666676 to 28671045 4369 unclassified gene RIKEN cDNA D330005D02 gene
Tssr140662 16 28668797 to 28668806 9 - TSS region transcription start site region 140662
Tssr140663 16 28683594 to 28683596 2 - TSS region transcription start site region 140663
D16Mit89 16 28690314 to 28690463 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 89
Tssr140664 16 28707328 to 28707330 2 - TSS region transcription start site region 140664
Tssr140665 16 28714542 to 28714546 4 - TSS region transcription start site region 140665
Cpgi8139 16 28752619 to 28752814 195 CpG island CpG island 8139
Tssr140666 16 28753192 to 28753252 60 - TSS region transcription start site region 140666
Gm20018 16 28788199 to 28794253 6054 - pseudogene predicted gene, 20018
Mb21d2 16 28826176 to 28929673 103497 - protein coding gene Mab-21 domain containing 2
Cpgi8140 16 28827864 to 28828195 331 CpG island CpG island 8140
Tssr140667 16 28902593 to 28902615 22 - TSS region transcription start site region 140667
Tssr140668 16 28911815 to 28911820 5 - TSS region transcription start site region 140668