Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:26549034-28229089

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8132 16 26581188 to 26582105 917 CpG island CpG island 8132
Il1rap 16 26581704 to 26730117 148413 + protein coding gene interleukin 1 receptor accessory protein
Tssr137816 16 26581725 to 26581763 38 + TSS region transcription start site region 137816
Tssr137817 16 26582340 to 26582344 4 + TSS region transcription start site region 137817
Tssr137818 16 26641076 to 26641080 4 + TSS region transcription start site region 137818
Tssr4833 16 26692722 to 26692728 6 - TSS region transcription start site region 4833
Gm20319 16 26714682 to 26755502 40820 - antisense lncRNA gene predicted gene, 20319
Tssr140640 16 26755498 to 26755503 5 - TSS region transcription start site region 140640
Tssr140641 16 26831619 to 26831625 6 - TSS region transcription start site region 140641
Gmnc 16 26957235 to 26991667 34432 - protein coding gene geminin coiled-coil domain containing
Cpgi8133 16 26967910 to 26968380 470 CpG island CpG island 8133
2610005G05Rik 16 26991894 to 26992572 678 unclassified gene RIKEN cDNA 2610005G05 gene
Obq35 16 27062881 to 27062881 0 QTL obesity QTL 35
D16Dcr3 16 27292551 to 27292646 95 DNA segment DNA Segment, Chr 16, Derry C. Roopenian 3
Tssr4834 16 27302882 to 27302883 1 + TSS region transcription start site region 4834
Tssr137819 16 27307632 to 27307650 18 + TSS region transcription start site region 137819
Ostn 16 27307641 to 27351209 43568 + protein coding gene osteocrin
Gm32312 16 27317944 to 27326641 8697 - antisense lncRNA gene predicted gene, 32312
Gm15970 16 27343114 to 27343943 829 - pseudogene predicted gene 15970
Tssr140642 16 27348439 to 27348470 31 - TSS region transcription start site region 140642
Uts2b 16 27353322 to 27370239 16917 - protein coding gene urotensin 2B
Tssr140643 16 27370214 to 27370217 3 - TSS region transcription start site region 140643
Cpgi8134 16 27388727 to 27389427 700 CpG island CpG island 8134
Tssr137820 16 27388755 to 27388758 3 + TSS region transcription start site region 137820
Tssr137821 16 27388848 to 27388859 11 + TSS region transcription start site region 137821
Ccdc50 16 27388869 to 27452218 63349 + protein coding gene coiled-coil domain containing 50
Tssr137822 16 27388949 to 27388966 17 + TSS region transcription start site region 137822
Tssr137823 16 27388972 to 27388998 26 + TSS region transcription start site region 137823
Tssr137824 16 27389004 to 27389031 27 + TSS region transcription start site region 137824
Tssr137825 16 27389034 to 27389089 55 + TSS region transcription start site region 137825
Tssr137826 16 27389097 to 27389111 14 + TSS region transcription start site region 137826
Tssr137827 16 27389911 to 27389943 32 + TSS region transcription start site region 137827
Tssr137828 16 27411073 to 27411084 11 + TSS region transcription start site region 137828
Tssr137829 16 27417172 to 27417193 21 + TSS region transcription start site region 137829
Tssr137830 16 27417218 to 27417233 15 + TSS region transcription start site region 137830
Tssr137831 16 27422769 to 27422785 16 + TSS region transcription start site region 137831
Tssr137832 16 27422925 to 27422967 42 + TSS region transcription start site region 137832
Tssr137833 16 27423059 to 27423099 40 + TSS region transcription start site region 137833
Tssr137834 16 27435058 to 27435066 8 + TSS region transcription start site region 137834
Tssr137835 16 27439630 to 27439644 14 + TSS region transcription start site region 137835
Tssr137836 16 27439816 to 27439835 19 + TSS region transcription start site region 137836
Tssr140644 16 27444570 to 27444616 46 - TSS region transcription start site region 140644
Tssr137837 16 27450387 to 27450393 6 + TSS region transcription start site region 137837
Gm32356 16 27467384 to 27474396 7012 + lncRNA gene predicted gene, 32356
Gm18234 16 27843362 to 27844412 1050 - pseudogene predicted gene, 18234
Tssr4835 16 27849828 to 27849849 21 + TSS region transcription start site region 4835
Tssr137838 16 27849873 to 27849903 30 + TSS region transcription start site region 137838
Gm10823 16 27849930 to 27926128 76198 + lincRNA gene predicted gene 10823
Gm49765 16 27970029 to 27970345 316 - pseudogene predicted gene, 49765
B230343J05Rik 16 28157782 to 28160031 2249 unclassified non-coding RNA gene RIKEN cDNA B230343J05 gene
Tssr140645 16 28159869 to 28159874 5 - TSS region transcription start site region 140645
Fgf12 16 28160098 to 28753068 592970 - protein coding gene fibroblast growth factor 12
Tssr140646 16 28219830 to 28219837 7 - TSS region transcription start site region 140646