Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:26069682-27400502

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
P3h2 16 25960323 to 26105784 145461 - protein coding gene prolyl 3-hydroxylase 2
2310061A09Rik 16 26069820 to 26073827 4007 unclassified non-coding RNA gene RIKEN cDNA 2310061A09 gene
Tssr140618 16 26073920 to 26073935 15 - TSS region transcription start site region 140618
Tssr140619 16 26073955 to 26073987 32 - TSS region transcription start site region 140619
Tssr140620 16 26073996 to 26074010 14 - TSS region transcription start site region 140620
Tssr140621 16 26075107 to 26075111 4 - TSS region transcription start site region 140621
Tssr140622 16 26095907 to 26095915 8 - TSS region transcription start site region 140622
Tssr140623 16 26095965 to 26095975 10 - TSS region transcription start site region 140623
Tssr140624 16 26099746 to 26099749 3 - TSS region transcription start site region 140624
Cpgi8130 16 26105016 to 26106145 1129 CpG island CpG island 8130
Tssr140625 16 26105634 to 26105654 20 - TSS region transcription start site region 140625
Tssr140626 16 26105777 to 26105855 78 - TSS region transcription start site region 140626
Tssr140627 16 26106194 to 26106202 8 - TSS region transcription start site region 140627
Tssr140628 16 26164265 to 26164275 10 - TSS region transcription start site region 140628
Gm41436 16 26251918 to 26339229 87311 + lncRNA gene predicted gene, 41436
Tssr137812 16 26251988 to 26251993 5 + TSS region transcription start site region 137812
Cldn1 16 26356645 to 26371839 15194 - protein coding gene claudin 1
Tssr140629 16 26358119 to 26358141 22 - TSS region transcription start site region 140629
Tssr140630 16 26358789 to 26358792 3 - TSS region transcription start site region 140630
Tssr140631 16 26359109 to 26359140 31 - TSS region transcription start site region 140631
Cpgi8131 16 26371364 to 26372042 678 CpG island CpG island 8131
Tssr140632 16 26371655 to 26371681 26 - TSS region transcription start site region 140632
Tssr140633 16 26371781 to 26371792 11 - TSS region transcription start site region 140633
Tssr140634 16 26371804 to 26371821 17 - TSS region transcription start site region 140634
Tssr140635 16 26371828 to 26371846 18 - TSS region transcription start site region 140635
D16Mit133 16 26400329 to 26400463 134 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 133
Tssr137813 16 26463073 to 26463087 14 + TSS region transcription start site region 137813
Cldn16 16 26463135 to 26482765 19630 + protein coding gene claudin 16
Tssr137814 16 26463146 to 26463161 15 + TSS region transcription start site region 137814
Tssr137815 16 26463465 to 26463478 13 + TSS region transcription start site region 137815
Tmem207 16 26503793 to 26526771 22978 - protein coding gene transmembrane protein 207
Tssr140636 16 26526725 to 26526738 13 - TSS region transcription start site region 140636
Tssr140637 16 26526744 to 26526774 30 - TSS region transcription start site region 140637
Tssr140638 16 26526808 to 26526819 11 - TSS region transcription start site region 140638
Tssr140639 16 26526826 to 26526837 11 - TSS region transcription start site region 140639
Cpgi8132 16 26581188 to 26582105 917 CpG island CpG island 8132
Il1rap 16 26581704 to 26730117 148413 + protein coding gene interleukin 1 receptor accessory protein
Tssr137816 16 26581725 to 26581763 38 + TSS region transcription start site region 137816
Tssr137817 16 26582340 to 26582344 4 + TSS region transcription start site region 137817
Tssr137818 16 26641076 to 26641080 4 + TSS region transcription start site region 137818
Tssr4833 16 26692722 to 26692728 6 - TSS region transcription start site region 4833
Gm20319 16 26714682 to 26755502 40820 - antisense lncRNA gene predicted gene, 20319
Tssr140640 16 26755498 to 26755503 5 - TSS region transcription start site region 140640
Tssr140641 16 26831619 to 26831625 6 - TSS region transcription start site region 140641
Gmnc 16 26957235 to 26991667 34432 - protein coding gene geminin coiled-coil domain containing
Cpgi8133 16 26967910 to 26968380 470 CpG island CpG island 8133
2610005G05Rik 16 26991894 to 26992572 678 unclassified gene RIKEN cDNA 2610005G05 gene
Obq35 16 27062881 to 27062881 0 QTL obesity QTL 35
D16Dcr3 16 27292551 to 27292646 95 DNA segment DNA Segment, Chr 16, Derry C. Roopenian 3
Tssr4834 16 27302882 to 27302883 1 + TSS region transcription start site region 4834
Tssr137819 16 27307632 to 27307650 18 + TSS region transcription start site region 137819
Ostn 16 27307641 to 27351209 43568 + protein coding gene osteocrin
Gm32312 16 27317944 to 27326641 8697 - antisense lncRNA gene predicted gene, 32312
Gm15970 16 27343114 to 27343943 829 - pseudogene predicted gene 15970
Tssr140642 16 27348439 to 27348470 31 - TSS region transcription start site region 140642
Uts2b 16 27353322 to 27370239 16917 - protein coding gene urotensin 2B
Tssr140643 16 27370214 to 27370217 3 - TSS region transcription start site region 140643
Cpgi8134 16 27388727 to 27389427 700 CpG island CpG island 8134
Tssr137820 16 27388755 to 27388758 3 + TSS region transcription start site region 137820
Tssr137821 16 27388848 to 27388859 11 + TSS region transcription start site region 137821
Ccdc50 16 27388869 to 27452218 63349 + protein coding gene coiled-coil domain containing 50
Tssr137822 16 27388949 to 27388966 17 + TSS region transcription start site region 137822
Tssr137823 16 27388972 to 27388998 26 + TSS region transcription start site region 137823
Tssr137824 16 27389004 to 27389031 27 + TSS region transcription start site region 137824
Tssr137825 16 27389034 to 27389089 55 + TSS region transcription start site region 137825
Tssr137826 16 27389097 to 27389111 14 + TSS region transcription start site region 137826
Tssr137827 16 27389911 to 27389943 32 + TSS region transcription start site region 137827