Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:25901645-26826839

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9230106L01Rik 16 25902386 to 25903422 1036 unclassified gene RIKEN cDNA 9230106L01 gene
Tssr137810 16 25948307 to 25948310 3 + TSS region transcription start site region 137810
Gm4524 16 25956475 to 25960342 3867 + antisense lncRNA gene predicted gene 4524
Tssr140613 16 25960030 to 25960053 23 - TSS region transcription start site region 140613
Tssr140614 16 25960247 to 25960258 11 - TSS region transcription start site region 140614
P3h2 16 25960323 to 26105784 145461 - protein coding gene prolyl 3-hydroxylase 2
Tssr140615 16 25960392 to 25960403 11 - TSS region transcription start site region 140615
Tssr140616 16 25965753 to 25965765 12 - TSS region transcription start site region 140616
AU015336 16 26031810 to 26041268 9458 - sense intronic lncRNA gene expressed sequence AU015336
Tssr137811 16 26062242 to 26062245 3 + TSS region transcription start site region 137811
Tssr140617 16 26064749 to 26064755 6 - TSS region transcription start site region 140617
2310061A09Rik 16 26069820 to 26073827 4007 unclassified non-coding RNA gene RIKEN cDNA 2310061A09 gene
Tssr140618 16 26073920 to 26073935 15 - TSS region transcription start site region 140618
Tssr140619 16 26073955 to 26073987 32 - TSS region transcription start site region 140619
Tssr140620 16 26073996 to 26074010 14 - TSS region transcription start site region 140620
Tssr140621 16 26075107 to 26075111 4 - TSS region transcription start site region 140621
Tssr140622 16 26095907 to 26095915 8 - TSS region transcription start site region 140622
Tssr140623 16 26095965 to 26095975 10 - TSS region transcription start site region 140623
Tssr140624 16 26099746 to 26099749 3 - TSS region transcription start site region 140624
Cpgi8130 16 26105016 to 26106145 1129 CpG island CpG island 8130
Tssr140625 16 26105634 to 26105654 20 - TSS region transcription start site region 140625
Tssr140626 16 26105777 to 26105855 78 - TSS region transcription start site region 140626
Tssr140627 16 26106194 to 26106202 8 - TSS region transcription start site region 140627
Tssr140628 16 26164265 to 26164275 10 - TSS region transcription start site region 140628
Gm41436 16 26251918 to 26339229 87311 + lncRNA gene predicted gene, 41436
Tssr137812 16 26251988 to 26251993 5 + TSS region transcription start site region 137812
Cldn1 16 26356645 to 26371839 15194 - protein coding gene claudin 1
Tssr140629 16 26358119 to 26358141 22 - TSS region transcription start site region 140629
Tssr140630 16 26358789 to 26358792 3 - TSS region transcription start site region 140630
Tssr140631 16 26359109 to 26359140 31 - TSS region transcription start site region 140631
Cpgi8131 16 26371364 to 26372042 678 CpG island CpG island 8131
Tssr140632 16 26371655 to 26371681 26 - TSS region transcription start site region 140632
Tssr140633 16 26371781 to 26371792 11 - TSS region transcription start site region 140633
Tssr140634 16 26371804 to 26371821 17 - TSS region transcription start site region 140634
Tssr140635 16 26371828 to 26371846 18 - TSS region transcription start site region 140635
D16Mit133 16 26400329 to 26400463 134 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 133
Tssr137813 16 26463073 to 26463087 14 + TSS region transcription start site region 137813
Cldn16 16 26463135 to 26482765 19630 + protein coding gene claudin 16
Tssr137814 16 26463146 to 26463161 15 + TSS region transcription start site region 137814
Tssr137815 16 26463465 to 26463478 13 + TSS region transcription start site region 137815
Tmem207 16 26503793 to 26526771 22978 - protein coding gene transmembrane protein 207
Tssr140636 16 26526725 to 26526738 13 - TSS region transcription start site region 140636
Tssr140637 16 26526744 to 26526774 30 - TSS region transcription start site region 140637
Tssr140638 16 26526808 to 26526819 11 - TSS region transcription start site region 140638
Tssr140639 16 26526826 to 26526837 11 - TSS region transcription start site region 140639
Cpgi8132 16 26581188 to 26582105 917 CpG island CpG island 8132
Il1rap 16 26581704 to 26730117 148413 + protein coding gene interleukin 1 receptor accessory protein
Tssr137816 16 26581725 to 26581763 38 + TSS region transcription start site region 137816
Tssr137817 16 26582340 to 26582344 4 + TSS region transcription start site region 137817
Tssr137818 16 26641076 to 26641080 4 + TSS region transcription start site region 137818
Tssr4833 16 26692722 to 26692728 6 - TSS region transcription start site region 4833
Gm20319 16 26714682 to 26755502 40820 - antisense lncRNA gene predicted gene, 20319
Tssr140640 16 26755498 to 26755503 5 - TSS region transcription start site region 140640