Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:25869265-26459275

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trp63 16 25683763 to 25892088 208325 + protein coding gene transformation related protein 63
Tssr137809 16 25871282 to 25871284 2 + TSS region transcription start site region 137809
Cpgi8129 16 25889120 to 25889311 191 CpG island CpG island 8129
9230106L01Rik 16 25902386 to 25903422 1036 unclassified gene RIKEN cDNA 9230106L01 gene
Tssr137810 16 25948307 to 25948310 3 + TSS region transcription start site region 137810
Gm4524 16 25956475 to 25960342 3867 + antisense lncRNA gene predicted gene 4524
Tssr140613 16 25960030 to 25960053 23 - TSS region transcription start site region 140613
Tssr140614 16 25960247 to 25960258 11 - TSS region transcription start site region 140614
P3h2 16 25960323 to 26105784 145461 - protein coding gene prolyl 3-hydroxylase 2
Tssr140615 16 25960392 to 25960403 11 - TSS region transcription start site region 140615
Tssr140616 16 25965753 to 25965765 12 - TSS region transcription start site region 140616
AU015336 16 26031810 to 26041268 9458 - sense intronic lncRNA gene expressed sequence AU015336
Tssr137811 16 26062242 to 26062245 3 + TSS region transcription start site region 137811
Tssr140617 16 26064749 to 26064755 6 - TSS region transcription start site region 140617
2310061A09Rik 16 26069820 to 26073827 4007 unclassified non-coding RNA gene RIKEN cDNA 2310061A09 gene
Tssr140618 16 26073920 to 26073935 15 - TSS region transcription start site region 140618
Tssr140619 16 26073955 to 26073987 32 - TSS region transcription start site region 140619
Tssr140620 16 26073996 to 26074010 14 - TSS region transcription start site region 140620
Tssr140621 16 26075107 to 26075111 4 - TSS region transcription start site region 140621
Tssr140622 16 26095907 to 26095915 8 - TSS region transcription start site region 140622
Tssr140623 16 26095965 to 26095975 10 - TSS region transcription start site region 140623
Tssr140624 16 26099746 to 26099749 3 - TSS region transcription start site region 140624
Cpgi8130 16 26105016 to 26106145 1129 CpG island CpG island 8130
Tssr140625 16 26105634 to 26105654 20 - TSS region transcription start site region 140625
Tssr140626 16 26105777 to 26105855 78 - TSS region transcription start site region 140626
Tssr140627 16 26106194 to 26106202 8 - TSS region transcription start site region 140627
Tssr140628 16 26164265 to 26164275 10 - TSS region transcription start site region 140628
Gm41436 16 26251918 to 26339229 87311 + lncRNA gene predicted gene, 41436
Tssr137812 16 26251988 to 26251993 5 + TSS region transcription start site region 137812
Cldn1 16 26356645 to 26371839 15194 - protein coding gene claudin 1
Tssr140629 16 26358119 to 26358141 22 - TSS region transcription start site region 140629
Tssr140630 16 26358789 to 26358792 3 - TSS region transcription start site region 140630
Tssr140631 16 26359109 to 26359140 31 - TSS region transcription start site region 140631
Cpgi8131 16 26371364 to 26372042 678 CpG island CpG island 8131
Tssr140632 16 26371655 to 26371681 26 - TSS region transcription start site region 140632
Tssr140633 16 26371781 to 26371792 11 - TSS region transcription start site region 140633
Tssr140634 16 26371804 to 26371821 17 - TSS region transcription start site region 140634
Tssr140635 16 26371828 to 26371846 18 - TSS region transcription start site region 140635
D16Mit133 16 26400329 to 26400463 134 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 133