Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:25045738-25775755

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr137787 16 25048155 to 25048195 40 + TSS region transcription start site region 137787
Tssr137788 16 25048366 to 25048387 21 + TSS region transcription start site region 137788
Tssr140608 16 25057977 to 25057993 16 - TSS region transcription start site region 140608
Cpgi8128 16 25058934 to 25059331 397 CpG island CpG island 8128
Tssr140609 16 25059264 to 25059280 16 - TSS region transcription start site region 140609
Tssr137789 16 25059361 to 25059380 19 + TSS region transcription start site region 137789
A230028O05Rik 16 25059639 to 25069058 9419 + lincRNA gene RIKEN cDNA A230028O05 gene
Tssr140610 16 25059722 to 25059755 33 - TSS region transcription start site region 140610
Tssr137790 16 25059905 to 25059950 45 + TSS region transcription start site region 137790
Gm41435 16 25089318 to 25115446 26128 + lncRNA gene predicted gene, 41435
Gm32196 16 25143714 to 25178129 34415 - lncRNA gene predicted gene, 32196
D16Mit156 16 25150797 to 25150901 104 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 156
Tssr140611 16 25178088 to 25178099 11 - TSS region transcription start site region 140611
Tssr137791 16 25286810 to 25286826 16 + TSS region transcription start site region 137791
Tprg 16 25286817 to 25422344 135527 + protein coding gene transformation related protein 63 regulated
Tssr137792 16 25286848 to 25286874 26 + TSS region transcription start site region 137792
Tssr137793 16 25385889 to 25385903 14 + TSS region transcription start site region 137793
Ewc6 16 25407302 to 25407302 0 QTL ethanol withdrawal and consumption 6
Tssr137794 16 25410738 to 25410755 17 + TSS region transcription start site region 137794
Tssr137795 16 25423493 to 25423513 20 + TSS region transcription start site region 137795
Gm18896 16 25441853 to 25443273 1420 - pseudogene predicted gene, 18896
Tssr140612 16 25517699 to 25517702 3 - TSS region transcription start site region 140612
Tssr137796 16 25523388 to 25523393 5 + TSS region transcription start site region 137796
D16Mit123 16 25581395 to 25581483 88 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 123
Gm20007 16 25672922 to 25673594 672 + pseudogene predicted gene, 20007
Trp63 16 25683763 to 25892088 208325 + protein coding gene transformation related protein 63
Tssr137797 16 25684146 to 25684199 53 + TSS region transcription start site region 137797
Gm24928 16 25702642 to 25702748 106 - snRNA gene predicted gene, 24928
Gm27005 16 25726696 to 25727616 920 + pseudogene predicted gene, 27005
Tssr137798 16 25752097 to 25752117 20 + TSS region transcription start site region 137798
Tssr137799 16 25752142 to 25752151 9 + TSS region transcription start site region 137799