Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:24738714-25583129

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lpp 16 24393507 to 24992578 599071 + protein coding gene LIM domain containing preferred translocation partner in lipoma
Mir28a 16 24827855 to 24827940 85 + miRNA gene microRNA 28a
Tssr137765 16 24879374 to 24879403 29 + TSS region transcription start site region 137765
Gm22672 16 24884173 to 24884306 133 + snoRNA gene predicted gene, 22672
9430040K09Rik 16 24893362 to 24898444 5082 unclassified gene RIKEN cDNA 9430040K09 gene
Tssr140603 16 24895202 to 24895208 6 - TSS region transcription start site region 140603
Tssr137766 16 24934145 to 24934151 6 + TSS region transcription start site region 137766
Tssr137767 16 24951274 to 24951278 4 + TSS region transcription start site region 137767
Tssr137768 16 24973191 to 24973203 12 + TSS region transcription start site region 137768
Tssr137769 16 24982699 to 24982713 14 + TSS region transcription start site region 137769
Tssr137770 16 24983002 to 24983015 13 + TSS region transcription start site region 137770
Tssr137771 16 24984235 to 24984237 2 + TSS region transcription start site region 137771
Tssr137772 16 25011201 to 25011205 4 + TSS region transcription start site region 137772
Tssr137773 16 25011409 to 25011415 6 + TSS region transcription start site region 137773
Tssr137774 16 25021984 to 25021995 11 + TSS region transcription start site region 137774
Tssr137775 16 25024170 to 25024175 5 + TSS region transcription start site region 137775
Tssr137776 16 25026499 to 25026506 7 + TSS region transcription start site region 137776
Tssr140604 16 25040111 to 25040122 11 - TSS region transcription start site region 140604
Tssr137777 16 25040253 to 25040278 25 + TSS region transcription start site region 137777
Tssr137778 16 25040285 to 25040294 9 + TSS region transcription start site region 137778
Tssr140605 16 25041230 to 25041246 16 - TSS region transcription start site region 140605
Tssr137779 16 25041686 to 25041711 25 + TSS region transcription start site region 137779
Tssr137780 16 25042181 to 25042237 56 + TSS region transcription start site region 137780
Tssr137781 16 25042245 to 25042266 21 + TSS region transcription start site region 137781
Tssr137782 16 25042303 to 25042334 31 + TSS region transcription start site region 137782
Tssr137783 16 25042343 to 25042346 3 + TSS region transcription start site region 137783
Tssr137784 16 25042371 to 25042382 11 + TSS region transcription start site region 137784
Tssr137785 16 25042985 to 25042997 12 + TSS region transcription start site region 137785
Tssr137786 16 25043364 to 25043399 35 + TSS region transcription start site region 137786
Tssr140606 16 25045207 to 25045222 15 - TSS region transcription start site region 140606
Tssr140607 16 25045223 to 25045253 30 - TSS region transcription start site region 140607
Tssr137787 16 25048155 to 25048195 40 + TSS region transcription start site region 137787
Tssr137788 16 25048366 to 25048387 21 + TSS region transcription start site region 137788
Tssr140608 16 25057977 to 25057993 16 - TSS region transcription start site region 140608
Cpgi8128 16 25058934 to 25059331 397 CpG island CpG island 8128
Tssr140609 16 25059264 to 25059280 16 - TSS region transcription start site region 140609
Tssr137789 16 25059361 to 25059380 19 + TSS region transcription start site region 137789
A230028O05Rik 16 25059639 to 25069058 9419 + lincRNA gene RIKEN cDNA A230028O05 gene
Tssr140610 16 25059722 to 25059755 33 - TSS region transcription start site region 140610
Tssr137790 16 25059905 to 25059950 45 + TSS region transcription start site region 137790
Gm41435 16 25089318 to 25115446 26128 + lncRNA gene predicted gene, 41435
Gm32196 16 25143714 to 25178129 34415 - lncRNA gene predicted gene, 32196
D16Mit156 16 25150797 to 25150901 104 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 156
Tssr140611 16 25178088 to 25178099 11 - TSS region transcription start site region 140611
Tssr137791 16 25286810 to 25286826 16 + TSS region transcription start site region 137791
Tprg 16 25286817 to 25422344 135527 + protein coding gene transformation related protein 63 regulated
Tssr137792 16 25286848 to 25286874 26 + TSS region transcription start site region 137792
Tssr137793 16 25385889 to 25385903 14 + TSS region transcription start site region 137793
Ewc6 16 25407302 to 25407302 0 QTL ethanol withdrawal and consumption 6
Tssr137794 16 25410738 to 25410755 17 + TSS region transcription start site region 137794
Tssr137795 16 25423493 to 25423513 20 + TSS region transcription start site region 137795
Gm18896 16 25441853 to 25443273 1420 - pseudogene predicted gene, 18896
Tssr140612 16 25517699 to 25517702 3 - TSS region transcription start site region 140612
Tssr137796 16 25523388 to 25523393 5 + TSS region transcription start site region 137796
D16Mit123 16 25581395 to 25581483 88 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 123