Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:23993507-25392578

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118 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31527 16 23989011 to 23999436 10425 + lncRNA gene predicted gene, 31527
Tssr137736 16 24012744 to 24012750 6 + TSS region transcription start site region 137736
Tssr140581 16 24013220 to 24013226 6 - TSS region transcription start site region 140581
Tssr140582 16 24013374 to 24013381 7 - TSS region transcription start site region 140582
Tssr140583 16 24013399 to 24013409 10 - TSS region transcription start site region 140583
Tssr4826 16 24025732 to 24025747 15 + TSS region transcription start site region 4826
Gm49518 16 24039906 to 24060637 20731 + lincRNA gene predicted gene, 49518
Gm46545 16 24076938 to 24082795 5857 - lincRNA gene predicted gene, 46545
Gm31583 16 24085083 to 24090089 5006 - lincRNA gene predicted gene, 31583
Tssr140584 16 24090032 to 24090046 14 - TSS region transcription start site region 140584
Tssr140585 16 24090059 to 24090100 41 - TSS region transcription start site region 140585
Tssr140586 16 24090106 to 24090118 12 - TSS region transcription start site region 140586
Tssr4827 16 24090171 to 24090180 9 - TSS region transcription start site region 4827
Tssr137737 16 24096355 to 24096363 8 + TSS region transcription start site region 137737
Gm32126 16 24158149 to 24159559 1410 - sense intronic lncRNA gene predicted gene, 32126
Tssr137738 16 24179425 to 24179427 2 + TSS region transcription start site region 137738
Gm31814 16 24186057 to 24263166 77109 - sense intronic lncRNA gene predicted gene, 31814
Tssr140587 16 24193030 to 24193035 5 - TSS region transcription start site region 140587
Tssr140588 16 24193387 to 24193404 17 - TSS region transcription start site region 140588
Tssr4828 16 24193421 to 24193435 14 - TSS region transcription start site region 4828
Tssr140589 16 24193627 to 24193650 23 - TSS region transcription start site region 140589
Tssr4829 16 24193857 to 24193874 17 + TSS region transcription start site region 4829
Tssr140590 16 24199893 to 24199926 33 - TSS region transcription start site region 140590
Tssr140591 16 24216493 to 24216531 38 - TSS region transcription start site region 140591
Gm38456 16 24271143 to 24296233 25090 - lncRNA gene predicted gene, 38456
Tssr140592 16 24296173 to 24296186 13 - TSS region transcription start site region 140592
Tssr140593 16 24296200 to 24296211 11 - TSS region transcription start site region 140593
Tssr140594 16 24296221 to 24296231 10 - TSS region transcription start site region 140594
Tssr137739 16 24327532 to 24327538 6 + TSS region transcription start site region 137739
Gm41434 16 24369790 to 24370232 442 - pseudogene predicted gene, 41434
Gm4521 16 24379609 to 24380545 936 - pseudogene predicted gene 4521
Tssr140595 16 24380305 to 24380326 21 - TSS region transcription start site region 140595
Tssr140596 16 24382343 to 24382352 9 - TSS region transcription start site region 140596
Tssr140597 16 24382387 to 24382391 4 - TSS region transcription start site region 140597
Lppos 16 24392556 to 24393655 1099 - lincRNA gene LIM domain containing preferred translocation partner in lipoma, opposite strand
Cpgi8127 16 24392886 to 24394355 1469 CpG island CpG island 8127
Tssr137740 16 24393379 to 24393428 49 + TSS region transcription start site region 137740
Tssr140598 16 24393417 to 24393459 42 - TSS region transcription start site region 140598
Tssr137741 16 24393464 to 24393528 64 + TSS region transcription start site region 137741
Lpp 16 24393507 to 24992578 599071 + protein coding gene LIM domain containing preferred translocation partner in lipoma
Tssr137742 16 24393534 to 24393545 11 + TSS region transcription start site region 137742
Tssr137743 16 24393547 to 24393554 7 + TSS region transcription start site region 137743
Tssr140599 16 24393618 to 24393697 79 - TSS region transcription start site region 140599
Tssr140600 16 24393698 to 24393716 18 - TSS region transcription start site region 140600
Tssr137744 16 24393708 to 24393763 55 + TSS region transcription start site region 137744
Gm24440 16 24406355 to 24406417 62 - snRNA gene predicted gene, 24440
Tssr137745 16 24418295 to 24418296 1 + TSS region transcription start site region 137745
Tssr137746 16 24433646 to 24433669 23 + TSS region transcription start site region 137746
Tssr137747 16 24448082 to 24448153 71 + TSS region transcription start site region 137747
Tssr4830 16 24452911 to 24452921 10 - TSS region transcription start site region 4830
Tssr137748 16 24457795 to 24457810 15 + TSS region transcription start site region 137748
Tssr137749 16 24486741 to 24486763 22 + TSS region transcription start site region 137749
Tssr137750 16 24486929 to 24486945 16 + TSS region transcription start site region 137750
Tssr137751 16 24486948 to 24486986 38 + TSS region transcription start site region 137751
Tssr137752 16 24487072 to 24487109 37 + TSS region transcription start site region 137752
Tssr137753 16 24488474 to 24488479 5 + TSS region transcription start site region 137753
Tssr137754 16 24525143 to 24525148 5 + TSS region transcription start site region 137754
Morf4l1-ps1 16 24529394 to 24530362 968 + pseudogene mortality factor 4 like 1, pseudogene 1
Tssr137755 16 24567877 to 24567882 5 + TSS region transcription start site region 137755
Tssr137756 16 24594776 to 24594788 12 + TSS region transcription start site region 137756
Tssr140601 16 24608295 to 24608326 31 - TSS region transcription start site region 140601
Tssr137757 16 24609281 to 24609285 4 + TSS region transcription start site region 137757
Tssr4831 16 24629606 to 24629618 12 + TSS region transcription start site region 4831
Tssr137758 16 24657036 to 24657060 24 + TSS region transcription start site region 137758
Tssr137759 16 24670517 to 24670548 31 + TSS region transcription start site region 137759
Tssr137760 16 24681747 to 24681757 10 + TSS region transcription start site region 137760
Tssr137761 16 24681769 to 24681785 16 + TSS region transcription start site region 137761
Tssr137762 16 24721842 to 24721882 40 + TSS region transcription start site region 137762
Tssr140602 16 24727449 to 24727453 4 - TSS region transcription start site region 140602
Tssr137763 16 24733635 to 24733650 15 + TSS region transcription start site region 137763
Tssr137764 16 24737448 to 24737460 12 + TSS region transcription start site region 137764
Mir28a 16 24827855 to 24827940 85 + miRNA gene microRNA 28a
Tssr137765 16 24879374 to 24879403 29 + TSS region transcription start site region 137765
Gm22672 16 24884173 to 24884306 133 + snoRNA gene predicted gene, 22672
9430040K09Rik 16 24893362 to 24898444 5082 unclassified gene RIKEN cDNA 9430040K09 gene
Tssr140603 16 24895202 to 24895208 6 - TSS region transcription start site region 140603
Tssr137766 16 24934145 to 24934151 6 + TSS region transcription start site region 137766
Tssr137767 16 24951274 to 24951278 4 + TSS region transcription start site region 137767
Tssr137768 16 24973191 to 24973203 12 + TSS region transcription start site region 137768
Tssr137769 16 24982699 to 24982713 14 + TSS region transcription start site region 137769
Tssr137770 16 24983002 to 24983015 13 + TSS region transcription start site region 137770
Tssr137771 16 24984235 to 24984237 2 + TSS region transcription start site region 137771
Tssr137772 16 25011201 to 25011205 4 + TSS region transcription start site region 137772
Tssr137773 16 25011409 to 25011415 6 + TSS region transcription start site region 137773
Tssr137774 16 25021984 to 25021995 11 + TSS region transcription start site region 137774
Tssr137775 16 25024170 to 25024175 5 + TSS region transcription start site region 137775
Tssr137776 16 25026499 to 25026506 7 + TSS region transcription start site region 137776
Tssr140604 16 25040111 to 25040122 11 - TSS region transcription start site region 140604
Tssr137777 16 25040253 to 25040278 25 + TSS region transcription start site region 137777
Tssr137778 16 25040285 to 25040294 9 + TSS region transcription start site region 137778
Tssr140605 16 25041230 to 25041246 16 - TSS region transcription start site region 140605
Tssr137779 16 25041686 to 25041711 25 + TSS region transcription start site region 137779
Tssr137780 16 25042181 to 25042237 56 + TSS region transcription start site region 137780
Tssr137781 16 25042245 to 25042266 21 + TSS region transcription start site region 137781
Tssr137782 16 25042303 to 25042334 31 + TSS region transcription start site region 137782
Tssr137783 16 25042343 to 25042346 3 + TSS region transcription start site region 137783
Tssr137784 16 25042371 to 25042382 11 + TSS region transcription start site region 137784
Tssr137785 16 25042985 to 25042997 12 + TSS region transcription start site region 137785
Tssr137786 16 25043364 to 25043399 35 + TSS region transcription start site region 137786
Tssr140606 16 25045207 to 25045222 15 - TSS region transcription start site region 140606
Tssr140607 16 25045223 to 25045253 30 - TSS region transcription start site region 140607
Tssr137787 16 25048155 to 25048195 40 + TSS region transcription start site region 137787
Tssr137788 16 25048366 to 25048387 21 + TSS region transcription start site region 137788
Tssr140608 16 25057977 to 25057993 16 - TSS region transcription start site region 140608
Cpgi8128 16 25058934 to 25059331 397 CpG island CpG island 8128
Tssr140609 16 25059264 to 25059280 16 - TSS region transcription start site region 140609
Tssr137789 16 25059361 to 25059380 19 + TSS region transcription start site region 137789
A230028O05Rik 16 25059639 to 25069058 9419 + lincRNA gene RIKEN cDNA A230028O05 gene
Tssr140610 16 25059722 to 25059755 33 - TSS region transcription start site region 140610
Tssr137790 16 25059905 to 25059950 45 + TSS region transcription start site region 137790
Gm41435 16 25089318 to 25115446 26128 + lncRNA gene predicted gene, 41435
Gm32196 16 25143714 to 25178129 34415 - lncRNA gene predicted gene, 32196
D16Mit156 16 25150797 to 25150901 104 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 156
Tssr140611 16 25178088 to 25178099 11 - TSS region transcription start site region 140611
Tssr137791 16 25286810 to 25286826 16 + TSS region transcription start site region 137791
Tprg 16 25286817 to 25422344 135527 + protein coding gene transformation related protein 63 regulated
Tssr137792 16 25286848 to 25286874 26 + TSS region transcription start site region 137792
Tssr137793 16 25385889 to 25385903 14 + TSS region transcription start site region 137793