Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:23730805-24050861

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit101 16 23736976 to 23737125 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 101
Gm49515 16 23779176 to 23780127 951 - pseudogene predicted gene, 49515
Gm31430 16 23804194 to 23846878 42684 - lncRNA gene predicted gene, 31430
Gm49516 16 23852991 to 23853966 975 + pseudogene predicted gene, 49516
Sst 16 23889581 to 23890844 1263 - protein coding gene somatostatin
Cpgi8121 16 23890519 to 23890985 466 CpG island CpG island 8121
Tssr140567 16 23890805 to 23890861 56 - TSS region transcription start site region 140567
Rtp2 16 23925548 to 23930794 5246 - protein coding gene receptor transporter protein 2
Cpgi8122 16 23927295 to 23927739 444 CpG island CpG island 8122
D16Mit102 16 23963526 to 23963654 128 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 102
Bcl6 16 23965052 to 23988612 23560 - protein coding gene B cell leukemia/lymphoma 6
Tssr140568 16 23973226 to 23973232 6 - TSS region transcription start site region 140568
Tssr140569 16 23974938 to 23974953 15 - TSS region transcription start site region 140569
Tssr140570 16 23976244 to 23976294 50 - TSS region transcription start site region 140570
Tssr140571 16 23977679 to 23977689 10 - TSS region transcription start site region 140571
Tssr140572 16 23977843 to 23977863 20 - TSS region transcription start site region 140572
Cpgi8123 16 23981080 to 23981508 428 CpG island CpG island 8123
Tssr4825 16 23981188 to 23981192 4 - TSS region transcription start site region 4825
Tssr140573 16 23981197 to 23981204 7 - TSS region transcription start site region 140573
Tssr140574 16 23981223 to 23981256 33 - TSS region transcription start site region 140574
Tssr140575 16 23981284 to 23981292 8 - TSS region transcription start site region 140575
Cpgi8124 16 23984176 to 23985156 980 CpG island CpG island 8124
2900064B18Rik 16 23985595 to 23986728 1133 unclassified gene RIKEN cDNA 2900064B18 gene
Tssr137733 16 23986466 to 23986485 19 + TSS region transcription start site region 137733
Cpgi8125 16 23986991 to 23987422 431 CpG island CpG island 8125
Cpgi8126 16 23987462 to 23989158 1696 CpG island CpG island 8126
Tssr140576 16 23988233 to 23988235 2 - TSS region transcription start site region 140576
Gm37419 16 23988482 to 23988595 113 + protein coding gene predicted gene, 37419
Tssr140577 16 23988537 to 23988544 7 - TSS region transcription start site region 140577
Tssr140578 16 23988563 to 23988574 11 - TSS region transcription start site region 140578
Tssr140579 16 23988600 to 23988607 7 - TSS region transcription start site region 140579
Tssr140580 16 23988625 to 23988641 16 - TSS region transcription start site region 140580
Tssr137734 16 23988957 to 23988986 29 + TSS region transcription start site region 137734
Tssr137735 16 23988994 to 23989005 11 + TSS region transcription start site region 137735
Gm31527 16 23989011 to 23999436 10425 + lncRNA gene predicted gene, 31527
Tssr137736 16 24012744 to 24012750 6 + TSS region transcription start site region 137736
Tssr140581 16 24013220 to 24013226 6 - TSS region transcription start site region 140581
Tssr140582 16 24013374 to 24013381 7 - TSS region transcription start site region 140582
Tssr140583 16 24013399 to 24013409 10 - TSS region transcription start site region 140583
Tssr4826 16 24025732 to 24025747 15 + TSS region transcription start site region 4826
Gm49518 16 24039906 to 24060637 20731 + lincRNA gene predicted gene, 49518