Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:23229133-23633960

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St6gal1 16 23224740 to 23360350 135610 + protein coding gene beta galactoside alpha 2,6 sialyltransferase 1
Tssr137687 16 23231002 to 23231006 4 + TSS region transcription start site region 137687
Tssr140554 16 23233569 to 23233601 32 - TSS region transcription start site region 140554
Tssr137688 16 23234138 to 23234141 3 + TSS region transcription start site region 137688
Tssr137689 16 23237360 to 23237368 8 + TSS region transcription start site region 137689
Tssr137690 16 23237370 to 23237382 12 + TSS region transcription start site region 137690
Tssr137691 16 23237403 to 23237409 6 + TSS region transcription start site region 137691
Tssr140555 16 23237909 to 23237912 3 - TSS region transcription start site region 140555
Tssr137692 16 23239354 to 23239357 3 + TSS region transcription start site region 137692
Tssr137693 16 23250789 to 23250817 28 + TSS region transcription start site region 137693
Tssr137694 16 23256932 to 23256953 21 + TSS region transcription start site region 137694
Tssr137695 16 23263017 to 23263045 28 + TSS region transcription start site region 137695
Tssr137696 16 23268416 to 23268432 16 + TSS region transcription start site region 137696
Tssr137697 16 23268463 to 23268479 16 + TSS region transcription start site region 137697
Tssr137698 16 23268495 to 23268539 44 + TSS region transcription start site region 137698
Tssr137699 16 23269310 to 23269328 18 + TSS region transcription start site region 137699
Tssr137700 16 23269334 to 23269356 22 + TSS region transcription start site region 137700
Tssr137701 16 23269577 to 23269610 33 + TSS region transcription start site region 137701
Tssr137702 16 23269617 to 23269634 17 + TSS region transcription start site region 137702
Tssr137703 16 23269637 to 23269659 22 + TSS region transcription start site region 137703
5830449F15Rik 16 23280160 to 23280684 524 unclassified gene RIKEN cDNA 5830449F15 gene
Tssr137704 16 23280190 to 23280194 4 + TSS region transcription start site region 137704
Tssr137705 16 23290464 to 23290534 70 + TSS region transcription start site region 137705
Tssr137706 16 23307705 to 23307724 19 + TSS region transcription start site region 137706
Tssr137707 16 23307753 to 23307768 15 + TSS region transcription start site region 137707
Tssr137708 16 23307914 to 23307934 20 + TSS region transcription start site region 137708
Tssr137709 16 23308042 to 23308053 11 + TSS region transcription start site region 137709
Tssr137710 16 23308109 to 23308112 3 + TSS region transcription start site region 137710
Tssr137711 16 23308136 to 23308150 14 + TSS region transcription start site region 137711
Tssr137712 16 23317548 to 23317567 19 + TSS region transcription start site region 137712
Tssr137713 16 23317571 to 23317582 11 + TSS region transcription start site region 137713
Tssr137714 16 23317600 to 23317632 32 + TSS region transcription start site region 137714
Tssr137715 16 23317637 to 23317644 7 + TSS region transcription start site region 137715
Tssr137716 16 23320797 to 23320805 8 + TSS region transcription start site region 137716
Tssr137717 16 23320837 to 23320843 6 + TSS region transcription start site region 137717
Tssr137718 16 23320863 to 23320876 13 + TSS region transcription start site region 137718
Gm30814 16 23325821 to 23327435 1614 - lncRNA gene predicted gene, 30814
Tssr140556 16 23375057 to 23375063 6 - TSS region transcription start site region 140556
Tssr137719 16 23375223 to 23375255 32 + TSS region transcription start site region 137719
Tssr137720 16 23387520 to 23387552 32 + TSS region transcription start site region 137720
Gm23430 16 23423422 to 23423735 313 - unclassified non-coding RNA gene predicted gene, 23430
Gm23066 16 23425651 to 23425721 70 + snRNA gene predicted gene, 23066
Rtp1 16 23429133 to 23433960 4827 + protein coding gene receptor transporter protein 1
Cpgi8119 16 23431122 to 23431588 466 CpG island CpG island 8119
Tssr140557 16 23449828 to 23449833 5 - TSS region transcription start site region 140557
Masp1 16 23451785 to 23521074 69289 - protein coding gene mannan-binding lectin serine peptidase 1
Tssr140558 16 23496258 to 23496261 3 - TSS region transcription start site region 140558
Tssr140559 16 23500488 to 23500489 1 - TSS region transcription start site region 140559
Gm49514 16 23514270 to 23515062 792 + pseudogene predicted gene, 49514
Gm31077 16 23515293 to 23588307 73014 + lncRNA gene predicted gene, 31077
Gm45338 16 23520210 to 23560081 39871 + unclassified non-coding RNA gene predicted gene 45338
Tssr137721 16 23520334 to 23520363 29 + TSS region transcription start site region 137721
Tssr140560 16 23520579 to 23520673 94 - TSS region transcription start site region 140560
Tssr140561 16 23520691 to 23520701 10 - TSS region transcription start site region 140561
Tssr140562 16 23520778 to 23520793 15 - TSS region transcription start site region 140562
Tssr140563 16 23520801 to 23520815 14 - TSS region transcription start site region 140563
Tssr140564 16 23520850 to 23520860 10 - TSS region transcription start site region 140564
Tssr140565 16 23520998 to 23521006 8 - TSS region transcription start site region 140565
Cpgi8120 16 23551111 to 23551295 184 CpG island CpG island 8120
Rtp4 16 23601293 to 23614222 12929 + protein coding gene receptor transporter protein 4
Tssr140566 16 23609787 to 23609826 39 - TSS region transcription start site region 140566
Tssr137722 16 23609895 to 23609961 66 + TSS region transcription start site region 137722
Tssr137723 16 23609962 to 23609999 37 + TSS region transcription start site region 137723
Tssr137724 16 23610000 to 23610032 32 + TSS region transcription start site region 137724
Tssr137725 16 23610069 to 23610082 13 + TSS region transcription start site region 137725
Tssr137726 16 23611380 to 23611407 27 + TSS region transcription start site region 137726
Tssr137727 16 23612870 to 23612895 25 + TSS region transcription start site region 137727
Tssr137728 16 23612949 to 23612978 29 + TSS region transcription start site region 137728
Tssr137729 16 23613141 to 23613178 37 + TSS region transcription start site region 137729
Tssr137730 16 23613287 to 23613319 32 + TSS region transcription start site region 137730
Tssr137731 16 23613351 to 23613365 14 + TSS region transcription start site region 137731
Tssr137732 16 23613369 to 23613413 44 + TSS region transcription start site region 137732