Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22964953-23194975

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kng2 16 22985852 to 23029101 43249 - protein coding gene kininogen 2
Gm6493 16 23014208 to 23017038 2830 - pseudogene predicted gene 6493
Tssr140531 16 23025227 to 23025240 13 - TSS region transcription start site region 140531
Tssr140532 16 23029012 to 23029026 14 - TSS region transcription start site region 140532
Tssr140533 16 23029062 to 23029076 14 - TSS region transcription start site region 140533
Tssr140534 16 23029080 to 23029106 26 - TSS region transcription start site region 140534
Tssr140535 16 23029115 to 23029138 23 - TSS region transcription start site region 140535
Tssr140536 16 23029371 to 23029376 5 - TSS region transcription start site region 140536
Tssr140537 16 23029403 to 23029416 13 - TSS region transcription start site region 140537
Gm8128 16 23034032 to 23034524 492 + pseudogene predicted gene 8128
Gm23715 16 23046959 to 23047064 105 + snRNA gene predicted gene, 23715
Tssr137638 16 23050224 to 23050227 3 + TSS region transcription start site region 137638
Gm8130 16 23050282 to 23050851 569 + pseudogene predicted gene 8130
Tssr4821 16 23050344 to 23050367 23 + TSS region transcription start site region 4821
Kng1 16 23058220 to 23082078 23858 + protein coding gene kininogen 1
Tssr137639 16 23058326 to 23058351 25 + TSS region transcription start site region 137639
Tssr137640 16 23058533 to 23058544 11 + TSS region transcription start site region 137640
Tssr137641 16 23058579 to 23058602 23 + TSS region transcription start site region 137641
Tssr4822 16 23060375 to 23060378 3 + TSS region transcription start site region 4822
Tssr137642 16 23060385 to 23060393 8 + TSS region transcription start site region 137642
Tssr137643 16 23060424 to 23060435 11 + TSS region transcription start site region 137643
Tssr137644 16 23060447 to 23060454 7 + TSS region transcription start site region 137644
Tssr137645 16 23061636 to 23061653 17 + TSS region transcription start site region 137645
Tssr137646 16 23062115 to 23062122 7 + TSS region transcription start site region 137646
Tssr137647 16 23067686 to 23067710 24 + TSS region transcription start site region 137647
Tssr137648 16 23067722 to 23067725 3 + TSS region transcription start site region 137648
Tssr137649 16 23069280 to 23069291 11 + TSS region transcription start site region 137649
Tssr137650 16 23074718 to 23074752 34 + TSS region transcription start site region 137650
Tssr137651 16 23079001 to 23079012 11 + TSS region transcription start site region 137651
Tssr137652 16 23079727 to 23079731 4 + TSS region transcription start site region 137652
Tssr137653 16 23079953 to 23079975 22 + TSS region transcription start site region 137653
Gm8134 16 23092943 to 23094465 1522 + pseudogene predicted gene 8134
Gm30693 16 23096552 to 23103165 6613 - lncRNA gene predicted gene, 30693
Tssr140538 16 23098017 to 23098021 4 - TSS region transcription start site region 140538
Tssr140539 16 23099698 to 23099715 17 - TSS region transcription start site region 140539
Cpgi8115 16 23107045 to 23108554 1509 CpG island CpG island 8115
Tssr137654 16 23107390 to 23107401 11 + TSS region transcription start site region 137654
Tssr137655 16 23107413 to 23107430 17 + TSS region transcription start site region 137655
Eif4a2 16 23107444 to 23114136 6692 + protein coding gene eukaryotic translation initiation factor 4A2
Tssr137656 16 23107754 to 23107761 7 + TSS region transcription start site region 137656
Tssr140540 16 23107977 to 23108006 29 - TSS region transcription start site region 140540
Tssr140541 16 23108104 to 23108118 14 - TSS region transcription start site region 140541
Tssr140542 16 23108134 to 23108143 9 - TSS region transcription start site region 140542
Snord2 16 23108953 to 23109020 67 + snoRNA gene small nucleolar RNA, C/D box 2
Gm24201 16 23110383 to 23110507 124 + snoRNA gene predicted gene, 24201
Gm49346 16 23110753 to 23110858 105 + miRNA gene predicted gene, 49346
Snora81 16 23110770 to 23110933 163 + snoRNA gene small nucleolar RNA, H/ACA box 81
Gm26447 16 23111301 to 23111429 128 + snoRNA gene predicted gene, 26447
Gm24616 16 23111617 to 23111755 138 + snoRNA gene predicted gene, 24616
Tssr137657 16 23112242 to 23112294 52 + TSS region transcription start site region 137657
Rfc4 16 23113948 to 23127730 13782 - protein coding gene replication factor C (activator 1) 4
Cpgi8116 16 23127510 to 23128480 970 CpG island CpG island 8116
Tssr140543 16 23127702 to 23127746 44 - TSS region transcription start site region 140543
Tssr137658 16 23127783 to 23127824 41 + TSS region transcription start site region 137658
6330408M09Rik 16 23127793 to 23128922 1129 + bidirectional promoter lncRNA gene RIKEN cDNA 6330408M09 gene
Gm49624 16 23133906 to 23134320 414 - pseudogene predicted gene, 49624
Adipoq 16 23146536 to 23157968 11432 + protein coding gene adiponectin, C1Q and collagen domain containing
Tssr4823 16 23146567 to 23146578 11 + TSS region transcription start site region 4823
Tssr137659 16 23146580 to 23146621 41 + TSS region transcription start site region 137659
Tssr140544 16 23157201 to 23157220 19 - TSS region transcription start site region 140544
Tssr137660 16 23157208 to 23157230 22 + TSS region transcription start site region 137660
Tssr140545 16 23157230 to 23157232 2 - TSS region transcription start site region 140545
Tssr140546 16 23157253 to 23157262 9 - TSS region transcription start site region 140546
Tssr137661 16 23157333 to 23157349 16 + TSS region transcription start site region 137661
Cpgi8117 16 23165235 to 23165438 203 CpG island CpG island 8117
Tssr140547 16 23171014 to 23171028 14 - TSS region transcription start site region 140547
C730014E05Rik 16 23174788 to 23218929 44141 + lncRNA gene RIKEN cDNA C730014E05 gene
Tssr137662 16 23175177 to 23175193 16 + TSS region transcription start site region 137662
Tssr137663 16 23175223 to 23175237 14 + TSS region transcription start site region 137663
Tssr137664 16 23175253 to 23175313 60 + TSS region transcription start site region 137664
B630019A10Rik 16 23175280 to 23224446 49166 + antisense lncRNA gene RIKEN cDNA B630019A10 gene
Tssr137665 16 23175350 to 23175377 27 + TSS region transcription start site region 137665
Tssr137666 16 23175425 to 23175434 9 + TSS region transcription start site region 137666
Tssr137667 16 23179137 to 23179142 5 + TSS region transcription start site region 137667
Gm6630 16 23179556 to 23180009 453 + pseudogene predicted pseudogene 6630
Tssr140548 16 23181594 to 23181604 10 - TSS region transcription start site region 140548
Tssr137668 16 23192068 to 23192075 7 + TSS region transcription start site region 137668
Tssr137669 16 23192094 to 23192141 47 + TSS region transcription start site region 137669
Tssr137670 16 23192144 to 23192171 27 + TSS region transcription start site region 137670
Tssr4824 16 23192203 to 23192216 13 + TSS region transcription start site region 4824