Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22955424-23165435

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hrg 16 22951072 to 22961656 10584 + protein coding gene histidine-rich glycoprotein
Skl7 16 22956502 to 22956690 188 QTL skeletal size (tail length) 7
Ipng3 16 22956502 to 57773713 34817211 QTL imprinted postnatal growth 3
D16Mit2 16 22956502 to 22956690 188 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 2
Bgeq15 16 22956502 to 22956690 188 QTL body growth early QTL 15
Skull23 16 22956502 to 22956690 188 QTL skull morphology 23
Skts9 16 22956502 to 22956690 188 QTL skin tumor susceptibility 9
Tssr137624 16 22957469 to 22957482 13 + TSS region transcription start site region 137624
Tssr137625 16 22957494 to 22957516 22 + TSS region transcription start site region 137625
Tssr137626 16 22959161 to 22959172 11 + TSS region transcription start site region 137626
Tssr137627 16 22959202 to 22959219 17 + TSS region transcription start site region 137627
Tssr137628 16 22960773 to 22960786 13 + TSS region transcription start site region 137628
Tssr137629 16 22960828 to 22960838 10 + TSS region transcription start site region 137629
Tssr137630 16 22960884 to 22960891 7 + TSS region transcription start site region 137630
Tssr137631 16 22960921 to 22960932 11 + TSS region transcription start site region 137631
Tssr137632 16 22960941 to 22960955 14 + TSS region transcription start site region 137632
Tssr137633 16 22960966 to 22960970 4 + TSS region transcription start site region 137633
Tssr137634 16 22961044 to 22961072 28 + TSS region transcription start site region 137634
Tssr137635 16 22961129 to 22961144 15 + TSS region transcription start site region 137635
Tssr137636 16 22961239 to 22961247 8 + TSS region transcription start site region 137636
Tssr137637 16 22961294 to 22961301 7 + TSS region transcription start site region 137637
Kng2 16 22985852 to 23029101 43249 - protein coding gene kininogen 2
Gm6493 16 23014208 to 23017038 2830 - pseudogene predicted gene 6493
Tssr140531 16 23025227 to 23025240 13 - TSS region transcription start site region 140531
Tssr140532 16 23029012 to 23029026 14 - TSS region transcription start site region 140532
Tssr140533 16 23029062 to 23029076 14 - TSS region transcription start site region 140533
Tssr140534 16 23029080 to 23029106 26 - TSS region transcription start site region 140534
Tssr140535 16 23029115 to 23029138 23 - TSS region transcription start site region 140535
Tssr140536 16 23029371 to 23029376 5 - TSS region transcription start site region 140536
Tssr140537 16 23029403 to 23029416 13 - TSS region transcription start site region 140537
Gm8128 16 23034032 to 23034524 492 + pseudogene predicted gene 8128
Gm23715 16 23046959 to 23047064 105 + snRNA gene predicted gene, 23715
Tssr137638 16 23050224 to 23050227 3 + TSS region transcription start site region 137638
Gm8130 16 23050282 to 23050851 569 + pseudogene predicted gene 8130
Tssr4821 16 23050344 to 23050367 23 + TSS region transcription start site region 4821
Kng1 16 23058220 to 23082078 23858 + protein coding gene kininogen 1
Tssr137639 16 23058326 to 23058351 25 + TSS region transcription start site region 137639
Tssr137640 16 23058533 to 23058544 11 + TSS region transcription start site region 137640
Tssr137641 16 23058579 to 23058602 23 + TSS region transcription start site region 137641
Tssr4822 16 23060375 to 23060378 3 + TSS region transcription start site region 4822
Tssr137642 16 23060385 to 23060393 8 + TSS region transcription start site region 137642
Tssr137643 16 23060424 to 23060435 11 + TSS region transcription start site region 137643
Tssr137644 16 23060447 to 23060454 7 + TSS region transcription start site region 137644
Tssr137645 16 23061636 to 23061653 17 + TSS region transcription start site region 137645
Tssr137646 16 23062115 to 23062122 7 + TSS region transcription start site region 137646
Tssr137647 16 23067686 to 23067710 24 + TSS region transcription start site region 137647
Tssr137648 16 23067722 to 23067725 3 + TSS region transcription start site region 137648
Tssr137649 16 23069280 to 23069291 11 + TSS region transcription start site region 137649
Tssr137650 16 23074718 to 23074752 34 + TSS region transcription start site region 137650
Tssr137651 16 23079001 to 23079012 11 + TSS region transcription start site region 137651
Tssr137652 16 23079727 to 23079731 4 + TSS region transcription start site region 137652
Tssr137653 16 23079953 to 23079975 22 + TSS region transcription start site region 137653
Gm8134 16 23092943 to 23094465 1522 + pseudogene predicted gene 8134
Gm30693 16 23096552 to 23103165 6613 - lncRNA gene predicted gene, 30693
Tssr140538 16 23098017 to 23098021 4 - TSS region transcription start site region 140538
Tssr140539 16 23099698 to 23099715 17 - TSS region transcription start site region 140539
Cpgi8115 16 23107045 to 23108554 1509 CpG island CpG island 8115
Tssr137654 16 23107390 to 23107401 11 + TSS region transcription start site region 137654
Tssr137655 16 23107413 to 23107430 17 + TSS region transcription start site region 137655
Eif4a2 16 23107444 to 23114136 6692 + protein coding gene eukaryotic translation initiation factor 4A2
Tssr137656 16 23107754 to 23107761 7 + TSS region transcription start site region 137656
Tssr140540 16 23107977 to 23108006 29 - TSS region transcription start site region 140540
Tssr140541 16 23108104 to 23108118 14 - TSS region transcription start site region 140541
Tssr140542 16 23108134 to 23108143 9 - TSS region transcription start site region 140542
Snord2 16 23108953 to 23109020 67 + snoRNA gene small nucleolar RNA, C/D box 2
Gm24201 16 23110383 to 23110507 124 + snoRNA gene predicted gene, 24201
Gm49346 16 23110753 to 23110858 105 + miRNA gene predicted gene, 49346
Snora81 16 23110770 to 23110933 163 + snoRNA gene small nucleolar RNA, H/ACA box 81
Gm26447 16 23111301 to 23111429 128 + snoRNA gene predicted gene, 26447
Gm24616 16 23111617 to 23111755 138 + snoRNA gene predicted gene, 24616
Tssr137657 16 23112242 to 23112294 52 + TSS region transcription start site region 137657
Rfc4 16 23113948 to 23127730 13782 - protein coding gene replication factor C (activator 1) 4
Cpgi8116 16 23127510 to 23128480 970 CpG island CpG island 8116
Tssr140543 16 23127702 to 23127746 44 - TSS region transcription start site region 140543
Tssr137658 16 23127783 to 23127824 41 + TSS region transcription start site region 137658
6330408M09Rik 16 23127793 to 23128922 1129 + bidirectional promoter lncRNA gene RIKEN cDNA 6330408M09 gene
Gm49624 16 23133906 to 23134320 414 - pseudogene predicted gene, 49624
Adipoq 16 23146536 to 23157968 11432 + protein coding gene adiponectin, C1Q and collagen domain containing
Tssr4823 16 23146567 to 23146578 11 + TSS region transcription start site region 4823
Tssr137659 16 23146580 to 23146621 41 + TSS region transcription start site region 137659
Tssr140544 16 23157201 to 23157220 19 - TSS region transcription start site region 140544
Tssr137660 16 23157208 to 23157230 22 + TSS region transcription start site region 137660
Tssr140545 16 23157230 to 23157232 2 - TSS region transcription start site region 140545
Tssr140546 16 23157253 to 23157262 9 - TSS region transcription start site region 140546
Tssr137661 16 23157333 to 23157349 16 + TSS region transcription start site region 137661
Cpgi8117 16 23165235 to 23165438 203 CpG island CpG island 8117