Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22915280-23484446

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196 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr137600 16 22917932 to 22917935 3 + TSS region transcription start site region 137600
Tssr137601 16 22918257 to 22918267 10 + TSS region transcription start site region 137601
Tssr137602 16 22918270 to 22918277 7 + TSS region transcription start site region 137602
Tssr137603 16 22918300 to 22918311 11 + TSS region transcription start site region 137603
Tssr137604 16 22918378 to 22918385 7 + TSS region transcription start site region 137604
Fetub 16 22918382 to 22939768 21386 + protein coding gene fetuin beta
Tssr137605 16 22918476 to 22918491 15 + TSS region transcription start site region 137605
Tssr137606 16 22919265 to 22919275 10 + TSS region transcription start site region 137606
Tssr137607 16 22920244 to 22920266 22 + TSS region transcription start site region 137607
Tssr137608 16 22920277 to 22920311 34 + TSS region transcription start site region 137608
Tssr137609 16 22920317 to 22920328 11 + TSS region transcription start site region 137609
Tssr137610 16 22920339 to 22920357 18 + TSS region transcription start site region 137610
Tssr137611 16 22920365 to 22920376 11 + TSS region transcription start site region 137611
Tssr137612 16 22920400 to 22920405 5 + TSS region transcription start site region 137612
Tssr137613 16 22920408 to 22920439 31 + TSS region transcription start site region 137613
Tssr137614 16 22920440 to 22920469 29 + TSS region transcription start site region 137614
Tssr137615 16 22929125 to 22929170 45 + TSS region transcription start site region 137615
Tssr137616 16 22929183 to 22929195 12 + TSS region transcription start site region 137616
Tssr137617 16 22929638 to 22929652 14 + TSS region transcription start site region 137617
Tssr137618 16 22939346 to 22939361 15 + TSS region transcription start site region 137618
Tssr137619 16 22939384 to 22939395 11 + TSS region transcription start site region 137619
Hrg 16 22951072 to 22961656 10584 + protein coding gene histidine-rich glycoprotein
Tssr137620 16 22951079 to 22951090 11 + TSS region transcription start site region 137620
Tssr137621 16 22951094 to 22951123 29 + TSS region transcription start site region 137621
Tssr137622 16 22951128 to 22951140 12 + TSS region transcription start site region 137622
Tssr137623 16 22951145 to 22951153 8 + TSS region transcription start site region 137623
D16Mit2 16 22956502 to 22956690 188 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 2
Bgeq15 16 22956502 to 22956690 188 QTL body growth early QTL 15
Skl7 16 22956502 to 22956690 188 QTL skeletal size (tail length) 7
Ipng3 16 22956502 to 57773713 34817211 QTL imprinted postnatal growth 3
Skts9 16 22956502 to 22956690 188 QTL skin tumor susceptibility 9
Skull23 16 22956502 to 22956690 188 QTL skull morphology 23
Tssr137624 16 22957469 to 22957482 13 + TSS region transcription start site region 137624
Tssr137625 16 22957494 to 22957516 22 + TSS region transcription start site region 137625
Tssr137626 16 22959161 to 22959172 11 + TSS region transcription start site region 137626
Tssr137627 16 22959202 to 22959219 17 + TSS region transcription start site region 137627
Tssr137628 16 22960773 to 22960786 13 + TSS region transcription start site region 137628
Tssr137629 16 22960828 to 22960838 10 + TSS region transcription start site region 137629
Tssr137630 16 22960884 to 22960891 7 + TSS region transcription start site region 137630
Tssr137631 16 22960921 to 22960932 11 + TSS region transcription start site region 137631
Tssr137632 16 22960941 to 22960955 14 + TSS region transcription start site region 137632
Tssr137633 16 22960966 to 22960970 4 + TSS region transcription start site region 137633
Tssr137634 16 22961044 to 22961072 28 + TSS region transcription start site region 137634
Tssr137635 16 22961129 to 22961144 15 + TSS region transcription start site region 137635
Tssr137636 16 22961239 to 22961247 8 + TSS region transcription start site region 137636
Tssr137637 16 22961294 to 22961301 7 + TSS region transcription start site region 137637
Kng2 16 22985852 to 23029101 43249 - protein coding gene kininogen 2
Gm6493 16 23014208 to 23017038 2830 - pseudogene predicted gene 6493
Tssr140531 16 23025227 to 23025240 13 - TSS region transcription start site region 140531
Tssr140532 16 23029012 to 23029026 14 - TSS region transcription start site region 140532
Tssr140533 16 23029062 to 23029076 14 - TSS region transcription start site region 140533
Tssr140534 16 23029080 to 23029106 26 - TSS region transcription start site region 140534
Tssr140535 16 23029115 to 23029138 23 - TSS region transcription start site region 140535
Tssr140536 16 23029371 to 23029376 5 - TSS region transcription start site region 140536
Tssr140537 16 23029403 to 23029416 13 - TSS region transcription start site region 140537
Gm8128 16 23034032 to 23034524 492 + pseudogene predicted gene 8128
Gm23715 16 23046959 to 23047064 105 + snRNA gene predicted gene, 23715
Tssr137638 16 23050224 to 23050227 3 + TSS region transcription start site region 137638
Gm8130 16 23050282 to 23050851 569 + pseudogene predicted gene 8130
Tssr4821 16 23050344 to 23050367 23 + TSS region transcription start site region 4821
Kng1 16 23058220 to 23082078 23858 + protein coding gene kininogen 1
Tssr137639 16 23058326 to 23058351 25 + TSS region transcription start site region 137639
Tssr137640 16 23058533 to 23058544 11 + TSS region transcription start site region 137640
Tssr137641 16 23058579 to 23058602 23 + TSS region transcription start site region 137641
Tssr4822 16 23060375 to 23060378 3 + TSS region transcription start site region 4822
Tssr137642 16 23060385 to 23060393 8 + TSS region transcription start site region 137642
Tssr137643 16 23060424 to 23060435 11 + TSS region transcription start site region 137643
Tssr137644 16 23060447 to 23060454 7 + TSS region transcription start site region 137644
Tssr137645 16 23061636 to 23061653 17 + TSS region transcription start site region 137645
Tssr137646 16 23062115 to 23062122 7 + TSS region transcription start site region 137646
Tssr137647 16 23067686 to 23067710 24 + TSS region transcription start site region 137647
Tssr137648 16 23067722 to 23067725 3 + TSS region transcription start site region 137648
Tssr137649 16 23069280 to 23069291 11 + TSS region transcription start site region 137649
Tssr137650 16 23074718 to 23074752 34 + TSS region transcription start site region 137650
Tssr137651 16 23079001 to 23079012 11 + TSS region transcription start site region 137651
Tssr137652 16 23079727 to 23079731 4 + TSS region transcription start site region 137652
Tssr137653 16 23079953 to 23079975 22 + TSS region transcription start site region 137653
Gm8134 16 23092943 to 23094465 1522 + pseudogene predicted gene 8134
Gm30693 16 23096552 to 23103165 6613 - lncRNA gene predicted gene, 30693
Tssr140538 16 23098017 to 23098021 4 - TSS region transcription start site region 140538
Tssr140539 16 23099698 to 23099715 17 - TSS region transcription start site region 140539
Cpgi8115 16 23107045 to 23108554 1509 CpG island CpG island 8115
Tssr137654 16 23107390 to 23107401 11 + TSS region transcription start site region 137654
Tssr137655 16 23107413 to 23107430 17 + TSS region transcription start site region 137655
Eif4a2 16 23107444 to 23114136 6692 + protein coding gene eukaryotic translation initiation factor 4A2
Tssr137656 16 23107754 to 23107761 7 + TSS region transcription start site region 137656
Tssr140540 16 23107977 to 23108006 29 - TSS region transcription start site region 140540
Tssr140541 16 23108104 to 23108118 14 - TSS region transcription start site region 140541
Tssr140542 16 23108134 to 23108143 9 - TSS region transcription start site region 140542
Snord2 16 23108953 to 23109020 67 + snoRNA gene small nucleolar RNA, C/D box 2
Gm24201 16 23110383 to 23110507 124 + snoRNA gene predicted gene, 24201
Gm49346 16 23110753 to 23110858 105 + miRNA gene predicted gene, 49346
Snora81 16 23110770 to 23110933 163 + snoRNA gene small nucleolar RNA, H/ACA box 81
Gm26447 16 23111301 to 23111429 128 + snoRNA gene predicted gene, 26447
Gm24616 16 23111617 to 23111755 138 + snoRNA gene predicted gene, 24616
Tssr137657 16 23112242 to 23112294 52 + TSS region transcription start site region 137657
Rfc4 16 23113948 to 23127730 13782 - protein coding gene replication factor C (activator 1) 4
Cpgi8116 16 23127510 to 23128480 970 CpG island CpG island 8116
Tssr140543 16 23127702 to 23127746 44 - TSS region transcription start site region 140543
Tssr137658 16 23127783 to 23127824 41 + TSS region transcription start site region 137658
6330408M09Rik 16 23127793 to 23128922 1129 + bidirectional promoter lncRNA gene RIKEN cDNA 6330408M09 gene
Gm49624 16 23133906 to 23134320 414 - pseudogene predicted gene, 49624
Adipoq 16 23146536 to 23157968 11432 + protein coding gene adiponectin, C1Q and collagen domain containing
Tssr4823 16 23146567 to 23146578 11 + TSS region transcription start site region 4823
Tssr137659 16 23146580 to 23146621 41 + TSS region transcription start site region 137659
Tssr140544 16 23157201 to 23157220 19 - TSS region transcription start site region 140544
Tssr137660 16 23157208 to 23157230 22 + TSS region transcription start site region 137660
Tssr140545 16 23157230 to 23157232 2 - TSS region transcription start site region 140545
Tssr140546 16 23157253 to 23157262 9 - TSS region transcription start site region 140546
Tssr137661 16 23157333 to 23157349 16 + TSS region transcription start site region 137661
Cpgi8117 16 23165235 to 23165438 203 CpG island CpG island 8117
Tssr140547 16 23171014 to 23171028 14 - TSS region transcription start site region 140547
C730014E05Rik 16 23174788 to 23218929 44141 + lncRNA gene RIKEN cDNA C730014E05 gene
Tssr137662 16 23175177 to 23175193 16 + TSS region transcription start site region 137662
Tssr137663 16 23175223 to 23175237 14 + TSS region transcription start site region 137663
Tssr137664 16 23175253 to 23175313 60 + TSS region transcription start site region 137664
B630019A10Rik 16 23175280 to 23224446 49166 + antisense lncRNA gene RIKEN cDNA B630019A10 gene
Tssr137665 16 23175350 to 23175377 27 + TSS region transcription start site region 137665
Tssr137666 16 23175425 to 23175434 9 + TSS region transcription start site region 137666
Tssr137667 16 23179137 to 23179142 5 + TSS region transcription start site region 137667
Gm6630 16 23179556 to 23180009 453 + pseudogene predicted pseudogene 6630
Tssr140548 16 23181594 to 23181604 10 - TSS region transcription start site region 140548
Tssr137668 16 23192068 to 23192075 7 + TSS region transcription start site region 137668
Tssr137669 16 23192094 to 23192141 47 + TSS region transcription start site region 137669
Tssr137670 16 23192144 to 23192171 27 + TSS region transcription start site region 137670
Tssr4824 16 23192203 to 23192216 13 + TSS region transcription start site region 4824
Gm15746 16 23197095 to 23198121 1026 - pseudogene predicted gene 15746
BC106179 16 23220656 to 23225484 4828 - unclassified non-coding RNA gene cDNA sequence BC106179
Tssr137671 16 23223694 to 23223718 24 + TSS region transcription start site region 137671
Cpgi8118 16 23224621 to 23226316 1695 CpG island CpG island 8118
Tssr137672 16 23224724 to 23224804 80 + TSS region transcription start site region 137672
St6gal1 16 23224740 to 23360350 135610 + protein coding gene beta galactoside alpha 2,6 sialyltransferase 1
Tssr137673 16 23224805 to 23224816 11 + TSS region transcription start site region 137673
Tssr137674 16 23224817 to 23224828 11 + TSS region transcription start site region 137674
Tssr137675 16 23224834 to 23224845 11 + TSS region transcription start site region 137675
Tssr137676 16 23224872 to 23224923 51 + TSS region transcription start site region 137676
Tssr137677 16 23224937 to 23224959 22 + TSS region transcription start site region 137677
Tssr137678 16 23224967 to 23224985 18 + TSS region transcription start site region 137678
Tssr140549 16 23225225 to 23225240 15 - TSS region transcription start site region 140549
Tssr140550 16 23225268 to 23225278 10 - TSS region transcription start site region 140550
Tssr140551 16 23225302 to 23225316 14 - TSS region transcription start site region 140551
Tssr140552 16 23225334 to 23225347 13 - TSS region transcription start site region 140552
Tssr137679 16 23225427 to 23225448 21 + TSS region transcription start site region 137679
Tssr137680 16 23225474 to 23225496 22 + TSS region transcription start site region 137680
Tssr137681 16 23226014 to 23226077 63 + TSS region transcription start site region 137681
Tssr137682 16 23226088 to 23226113 25 + TSS region transcription start site region 137682
Tssr137683 16 23226117 to 23226128 11 + TSS region transcription start site region 137683
Tssr137684 16 23226342 to 23226353 11 + TSS region transcription start site region 137684
Tssr140553 16 23226768 to 23226780 12 - TSS region transcription start site region 140553
Tssr137685 16 23227852 to 23227856 4 + TSS region transcription start site region 137685
Tssr137686 16 23228289 to 23228294 5 + TSS region transcription start site region 137686
Tssr137687 16 23231002 to 23231006 4 + TSS region transcription start site region 137687
Tssr140554 16 23233569 to 23233601 32 - TSS region transcription start site region 140554
Tssr137688 16 23234138 to 23234141 3 + TSS region transcription start site region 137688
Tssr137689 16 23237360 to 23237368 8 + TSS region transcription start site region 137689
Tssr137690 16 23237370 to 23237382 12 + TSS region transcription start site region 137690
Tssr137691 16 23237403 to 23237409 6 + TSS region transcription start site region 137691
Tssr140555 16 23237909 to 23237912 3 - TSS region transcription start site region 140555
Tssr137692 16 23239354 to 23239357 3 + TSS region transcription start site region 137692
Tssr137693 16 23250789 to 23250817 28 + TSS region transcription start site region 137693
Tssr137694 16 23256932 to 23256953 21 + TSS region transcription start site region 137694
Tssr137695 16 23263017 to 23263045 28 + TSS region transcription start site region 137695
Tssr137696 16 23268416 to 23268432 16 + TSS region transcription start site region 137696
Tssr137697 16 23268463 to 23268479 16 + TSS region transcription start site region 137697
Tssr137698 16 23268495 to 23268539 44 + TSS region transcription start site region 137698
Tssr137699 16 23269310 to 23269328 18 + TSS region transcription start site region 137699
Tssr137700 16 23269334 to 23269356 22 + TSS region transcription start site region 137700
Tssr137701 16 23269577 to 23269610 33 + TSS region transcription start site region 137701
Tssr137702 16 23269617 to 23269634 17 + TSS region transcription start site region 137702
Tssr137703 16 23269637 to 23269659 22 + TSS region transcription start site region 137703
5830449F15Rik 16 23280160 to 23280684 524 unclassified gene RIKEN cDNA 5830449F15 gene
Tssr137704 16 23280190 to 23280194 4 + TSS region transcription start site region 137704
Tssr137705 16 23290464 to 23290534 70 + TSS region transcription start site region 137705
Tssr137706 16 23307705 to 23307724 19 + TSS region transcription start site region 137706
Tssr137707 16 23307753 to 23307768 15 + TSS region transcription start site region 137707
Tssr137708 16 23307914 to 23307934 20 + TSS region transcription start site region 137708
Tssr137709 16 23308042 to 23308053 11 + TSS region transcription start site region 137709
Tssr137710 16 23308109 to 23308112 3 + TSS region transcription start site region 137710
Tssr137711 16 23308136 to 23308150 14 + TSS region transcription start site region 137711
Tssr137712 16 23317548 to 23317567 19 + TSS region transcription start site region 137712
Tssr137713 16 23317571 to 23317582 11 + TSS region transcription start site region 137713
Tssr137714 16 23317600 to 23317632 32 + TSS region transcription start site region 137714
Tssr137715 16 23317637 to 23317644 7 + TSS region transcription start site region 137715
Tssr137716 16 23320797 to 23320805 8 + TSS region transcription start site region 137716
Tssr137717 16 23320837 to 23320843 6 + TSS region transcription start site region 137717
Tssr137718 16 23320863 to 23320876 13 + TSS region transcription start site region 137718
Gm30814 16 23325821 to 23327435 1614 - lncRNA gene predicted gene, 30814
Tssr140556 16 23375057 to 23375063 6 - TSS region transcription start site region 140556
Tssr137719 16 23375223 to 23375255 32 + TSS region transcription start site region 137719
Tssr137720 16 23387520 to 23387552 32 + TSS region transcription start site region 137720
Gm23430 16 23423422 to 23423735 313 - unclassified non-coding RNA gene predicted gene, 23430
Gm23066 16 23425651 to 23425721 70 + snRNA gene predicted gene, 23066
Rtp1 16 23429133 to 23433960 4827 + protein coding gene receptor transporter protein 1
Cpgi8119 16 23431122 to 23431588 466 CpG island CpG island 8119
Tssr140557 16 23449828 to 23449833 5 - TSS region transcription start site region 140557
Masp1 16 23451785 to 23521074 69289 - protein coding gene mannan-binding lectin serine peptidase 1