Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22901014-23441028

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195 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30611 16 22900550 to 22913015 12465 - lncRNA gene predicted gene, 30611
Tssr137600 16 22917932 to 22917935 3 + TSS region transcription start site region 137600
Tssr137601 16 22918257 to 22918267 10 + TSS region transcription start site region 137601
Tssr137602 16 22918270 to 22918277 7 + TSS region transcription start site region 137602
Tssr137603 16 22918300 to 22918311 11 + TSS region transcription start site region 137603
Tssr137604 16 22918378 to 22918385 7 + TSS region transcription start site region 137604
Fetub 16 22918382 to 22939768 21386 + protein coding gene fetuin beta
Tssr137605 16 22918476 to 22918491 15 + TSS region transcription start site region 137605
Tssr137606 16 22919265 to 22919275 10 + TSS region transcription start site region 137606
Tssr137607 16 22920244 to 22920266 22 + TSS region transcription start site region 137607
Tssr137608 16 22920277 to 22920311 34 + TSS region transcription start site region 137608
Tssr137609 16 22920317 to 22920328 11 + TSS region transcription start site region 137609
Tssr137610 16 22920339 to 22920357 18 + TSS region transcription start site region 137610
Tssr137611 16 22920365 to 22920376 11 + TSS region transcription start site region 137611
Tssr137612 16 22920400 to 22920405 5 + TSS region transcription start site region 137612
Tssr137613 16 22920408 to 22920439 31 + TSS region transcription start site region 137613
Tssr137614 16 22920440 to 22920469 29 + TSS region transcription start site region 137614
Tssr137615 16 22929125 to 22929170 45 + TSS region transcription start site region 137615
Tssr137616 16 22929183 to 22929195 12 + TSS region transcription start site region 137616
Tssr137617 16 22929638 to 22929652 14 + TSS region transcription start site region 137617
Tssr137618 16 22939346 to 22939361 15 + TSS region transcription start site region 137618
Tssr137619 16 22939384 to 22939395 11 + TSS region transcription start site region 137619
Hrg 16 22951072 to 22961656 10584 + protein coding gene histidine-rich glycoprotein
Tssr137620 16 22951079 to 22951090 11 + TSS region transcription start site region 137620
Tssr137621 16 22951094 to 22951123 29 + TSS region transcription start site region 137621
Tssr137622 16 22951128 to 22951140 12 + TSS region transcription start site region 137622
Tssr137623 16 22951145 to 22951153 8 + TSS region transcription start site region 137623
Skl7 16 22956502 to 22956690 188 QTL skeletal size (tail length) 7
Ipng3 16 22956502 to 57773713 34817211 QTL imprinted postnatal growth 3
Skull23 16 22956502 to 22956690 188 QTL skull morphology 23
Bgeq15 16 22956502 to 22956690 188 QTL body growth early QTL 15
D16Mit2 16 22956502 to 22956690 188 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 2
Skts9 16 22956502 to 22956690 188 QTL skin tumor susceptibility 9
Tssr137624 16 22957469 to 22957482 13 + TSS region transcription start site region 137624
Tssr137625 16 22957494 to 22957516 22 + TSS region transcription start site region 137625
Tssr137626 16 22959161 to 22959172 11 + TSS region transcription start site region 137626
Tssr137627 16 22959202 to 22959219 17 + TSS region transcription start site region 137627
Tssr137628 16 22960773 to 22960786 13 + TSS region transcription start site region 137628
Tssr137629 16 22960828 to 22960838 10 + TSS region transcription start site region 137629
Tssr137630 16 22960884 to 22960891 7 + TSS region transcription start site region 137630
Tssr137631 16 22960921 to 22960932 11 + TSS region transcription start site region 137631
Tssr137632 16 22960941 to 22960955 14 + TSS region transcription start site region 137632
Tssr137633 16 22960966 to 22960970 4 + TSS region transcription start site region 137633
Tssr137634 16 22961044 to 22961072 28 + TSS region transcription start site region 137634
Tssr137635 16 22961129 to 22961144 15 + TSS region transcription start site region 137635
Tssr137636 16 22961239 to 22961247 8 + TSS region transcription start site region 137636
Tssr137637 16 22961294 to 22961301 7 + TSS region transcription start site region 137637
Kng2 16 22985852 to 23029101 43249 - protein coding gene kininogen 2
Gm6493 16 23014208 to 23017038 2830 - pseudogene predicted gene 6493
Tssr140531 16 23025227 to 23025240 13 - TSS region transcription start site region 140531
Tssr140532 16 23029012 to 23029026 14 - TSS region transcription start site region 140532
Tssr140533 16 23029062 to 23029076 14 - TSS region transcription start site region 140533
Tssr140534 16 23029080 to 23029106 26 - TSS region transcription start site region 140534
Tssr140535 16 23029115 to 23029138 23 - TSS region transcription start site region 140535
Tssr140536 16 23029371 to 23029376 5 - TSS region transcription start site region 140536
Tssr140537 16 23029403 to 23029416 13 - TSS region transcription start site region 140537
Gm8128 16 23034032 to 23034524 492 + pseudogene predicted gene 8128
Gm23715 16 23046959 to 23047064 105 + snRNA gene predicted gene, 23715
Tssr137638 16 23050224 to 23050227 3 + TSS region transcription start site region 137638
Gm8130 16 23050282 to 23050851 569 + pseudogene predicted gene 8130
Tssr4821 16 23050344 to 23050367 23 + TSS region transcription start site region 4821
Kng1 16 23058220 to 23082078 23858 + protein coding gene kininogen 1
Tssr137639 16 23058326 to 23058351 25 + TSS region transcription start site region 137639
Tssr137640 16 23058533 to 23058544 11 + TSS region transcription start site region 137640
Tssr137641 16 23058579 to 23058602 23 + TSS region transcription start site region 137641
Tssr4822 16 23060375 to 23060378 3 + TSS region transcription start site region 4822
Tssr137642 16 23060385 to 23060393 8 + TSS region transcription start site region 137642
Tssr137643 16 23060424 to 23060435 11 + TSS region transcription start site region 137643
Tssr137644 16 23060447 to 23060454 7 + TSS region transcription start site region 137644
Tssr137645 16 23061636 to 23061653 17 + TSS region transcription start site region 137645
Tssr137646 16 23062115 to 23062122 7 + TSS region transcription start site region 137646
Tssr137647 16 23067686 to 23067710 24 + TSS region transcription start site region 137647
Tssr137648 16 23067722 to 23067725 3 + TSS region transcription start site region 137648
Tssr137649 16 23069280 to 23069291 11 + TSS region transcription start site region 137649
Tssr137650 16 23074718 to 23074752 34 + TSS region transcription start site region 137650
Tssr137651 16 23079001 to 23079012 11 + TSS region transcription start site region 137651
Tssr137652 16 23079727 to 23079731 4 + TSS region transcription start site region 137652
Tssr137653 16 23079953 to 23079975 22 + TSS region transcription start site region 137653
Gm8134 16 23092943 to 23094465 1522 + pseudogene predicted gene 8134
Gm30693 16 23096552 to 23103165 6613 - lncRNA gene predicted gene, 30693
Tssr140538 16 23098017 to 23098021 4 - TSS region transcription start site region 140538
Tssr140539 16 23099698 to 23099715 17 - TSS region transcription start site region 140539
Cpgi8115 16 23107045 to 23108554 1509 CpG island CpG island 8115
Tssr137654 16 23107390 to 23107401 11 + TSS region transcription start site region 137654
Tssr137655 16 23107413 to 23107430 17 + TSS region transcription start site region 137655
Eif4a2 16 23107444 to 23114136 6692 + protein coding gene eukaryotic translation initiation factor 4A2
Tssr137656 16 23107754 to 23107761 7 + TSS region transcription start site region 137656
Tssr140540 16 23107977 to 23108006 29 - TSS region transcription start site region 140540
Tssr140541 16 23108104 to 23108118 14 - TSS region transcription start site region 140541
Tssr140542 16 23108134 to 23108143 9 - TSS region transcription start site region 140542
Snord2 16 23108953 to 23109020 67 + snoRNA gene small nucleolar RNA, C/D box 2
Gm24201 16 23110383 to 23110507 124 + snoRNA gene predicted gene, 24201
Gm49346 16 23110753 to 23110858 105 + miRNA gene predicted gene, 49346
Snora81 16 23110770 to 23110933 163 + snoRNA gene small nucleolar RNA, H/ACA box 81
Gm26447 16 23111301 to 23111429 128 + snoRNA gene predicted gene, 26447
Gm24616 16 23111617 to 23111755 138 + snoRNA gene predicted gene, 24616
Tssr137657 16 23112242 to 23112294 52 + TSS region transcription start site region 137657
Rfc4 16 23113948 to 23127730 13782 - protein coding gene replication factor C (activator 1) 4
Cpgi8116 16 23127510 to 23128480 970 CpG island CpG island 8116
Tssr140543 16 23127702 to 23127746 44 - TSS region transcription start site region 140543
Tssr137658 16 23127783 to 23127824 41 + TSS region transcription start site region 137658
6330408M09Rik 16 23127793 to 23128922 1129 + bidirectional promoter lncRNA gene RIKEN cDNA 6330408M09 gene
Gm49624 16 23133906 to 23134320 414 - pseudogene predicted gene, 49624
Adipoq 16 23146536 to 23157968 11432 + protein coding gene adiponectin, C1Q and collagen domain containing
Tssr4823 16 23146567 to 23146578 11 + TSS region transcription start site region 4823
Tssr137659 16 23146580 to 23146621 41 + TSS region transcription start site region 137659
Tssr140544 16 23157201 to 23157220 19 - TSS region transcription start site region 140544
Tssr137660 16 23157208 to 23157230 22 + TSS region transcription start site region 137660
Tssr140545 16 23157230 to 23157232 2 - TSS region transcription start site region 140545
Tssr140546 16 23157253 to 23157262 9 - TSS region transcription start site region 140546
Tssr137661 16 23157333 to 23157349 16 + TSS region transcription start site region 137661
Cpgi8117 16 23165235 to 23165438 203 CpG island CpG island 8117
Tssr140547 16 23171014 to 23171028 14 - TSS region transcription start site region 140547
C730014E05Rik 16 23174788 to 23218929 44141 + lncRNA gene RIKEN cDNA C730014E05 gene
Tssr137662 16 23175177 to 23175193 16 + TSS region transcription start site region 137662
Tssr137663 16 23175223 to 23175237 14 + TSS region transcription start site region 137663
Tssr137664 16 23175253 to 23175313 60 + TSS region transcription start site region 137664
B630019A10Rik 16 23175280 to 23224446 49166 + antisense lncRNA gene RIKEN cDNA B630019A10 gene
Tssr137665 16 23175350 to 23175377 27 + TSS region transcription start site region 137665
Tssr137666 16 23175425 to 23175434 9 + TSS region transcription start site region 137666
Tssr137667 16 23179137 to 23179142 5 + TSS region transcription start site region 137667
Gm6630 16 23179556 to 23180009 453 + pseudogene predicted pseudogene 6630
Tssr140548 16 23181594 to 23181604 10 - TSS region transcription start site region 140548
Tssr137668 16 23192068 to 23192075 7 + TSS region transcription start site region 137668
Tssr137669 16 23192094 to 23192141 47 + TSS region transcription start site region 137669
Tssr137670 16 23192144 to 23192171 27 + TSS region transcription start site region 137670
Tssr4824 16 23192203 to 23192216 13 + TSS region transcription start site region 4824
Gm15746 16 23197095 to 23198121 1026 - pseudogene predicted gene 15746
BC106179 16 23220656 to 23225484 4828 - unclassified non-coding RNA gene cDNA sequence BC106179
Tssr137671 16 23223694 to 23223718 24 + TSS region transcription start site region 137671
Cpgi8118 16 23224621 to 23226316 1695 CpG island CpG island 8118
Tssr137672 16 23224724 to 23224804 80 + TSS region transcription start site region 137672
St6gal1 16 23224740 to 23360350 135610 + protein coding gene beta galactoside alpha 2,6 sialyltransferase 1
Tssr137673 16 23224805 to 23224816 11 + TSS region transcription start site region 137673
Tssr137674 16 23224817 to 23224828 11 + TSS region transcription start site region 137674
Tssr137675 16 23224834 to 23224845 11 + TSS region transcription start site region 137675
Tssr137676 16 23224872 to 23224923 51 + TSS region transcription start site region 137676
Tssr137677 16 23224937 to 23224959 22 + TSS region transcription start site region 137677
Tssr137678 16 23224967 to 23224985 18 + TSS region transcription start site region 137678
Tssr140549 16 23225225 to 23225240 15 - TSS region transcription start site region 140549
Tssr140550 16 23225268 to 23225278 10 - TSS region transcription start site region 140550
Tssr140551 16 23225302 to 23225316 14 - TSS region transcription start site region 140551
Tssr140552 16 23225334 to 23225347 13 - TSS region transcription start site region 140552
Tssr137679 16 23225427 to 23225448 21 + TSS region transcription start site region 137679
Tssr137680 16 23225474 to 23225496 22 + TSS region transcription start site region 137680
Tssr137681 16 23226014 to 23226077 63 + TSS region transcription start site region 137681
Tssr137682 16 23226088 to 23226113 25 + TSS region transcription start site region 137682
Tssr137683 16 23226117 to 23226128 11 + TSS region transcription start site region 137683
Tssr137684 16 23226342 to 23226353 11 + TSS region transcription start site region 137684
Tssr140553 16 23226768 to 23226780 12 - TSS region transcription start site region 140553
Tssr137685 16 23227852 to 23227856 4 + TSS region transcription start site region 137685
Tssr137686 16 23228289 to 23228294 5 + TSS region transcription start site region 137686
Tssr137687 16 23231002 to 23231006 4 + TSS region transcription start site region 137687
Tssr140554 16 23233569 to 23233601 32 - TSS region transcription start site region 140554
Tssr137688 16 23234138 to 23234141 3 + TSS region transcription start site region 137688
Tssr137689 16 23237360 to 23237368 8 + TSS region transcription start site region 137689
Tssr137690 16 23237370 to 23237382 12 + TSS region transcription start site region 137690
Tssr137691 16 23237403 to 23237409 6 + TSS region transcription start site region 137691
Tssr140555 16 23237909 to 23237912 3 - TSS region transcription start site region 140555
Tssr137692 16 23239354 to 23239357 3 + TSS region transcription start site region 137692
Tssr137693 16 23250789 to 23250817 28 + TSS region transcription start site region 137693
Tssr137694 16 23256932 to 23256953 21 + TSS region transcription start site region 137694
Tssr137695 16 23263017 to 23263045 28 + TSS region transcription start site region 137695
Tssr137696 16 23268416 to 23268432 16 + TSS region transcription start site region 137696
Tssr137697 16 23268463 to 23268479 16 + TSS region transcription start site region 137697
Tssr137698 16 23268495 to 23268539 44 + TSS region transcription start site region 137698
Tssr137699 16 23269310 to 23269328 18 + TSS region transcription start site region 137699
Tssr137700 16 23269334 to 23269356 22 + TSS region transcription start site region 137700
Tssr137701 16 23269577 to 23269610 33 + TSS region transcription start site region 137701
Tssr137702 16 23269617 to 23269634 17 + TSS region transcription start site region 137702
Tssr137703 16 23269637 to 23269659 22 + TSS region transcription start site region 137703
5830449F15Rik 16 23280160 to 23280684 524 unclassified gene RIKEN cDNA 5830449F15 gene
Tssr137704 16 23280190 to 23280194 4 + TSS region transcription start site region 137704
Tssr137705 16 23290464 to 23290534 70 + TSS region transcription start site region 137705
Tssr137706 16 23307705 to 23307724 19 + TSS region transcription start site region 137706
Tssr137707 16 23307753 to 23307768 15 + TSS region transcription start site region 137707
Tssr137708 16 23307914 to 23307934 20 + TSS region transcription start site region 137708
Tssr137709 16 23308042 to 23308053 11 + TSS region transcription start site region 137709
Tssr137710 16 23308109 to 23308112 3 + TSS region transcription start site region 137710
Tssr137711 16 23308136 to 23308150 14 + TSS region transcription start site region 137711
Tssr137712 16 23317548 to 23317567 19 + TSS region transcription start site region 137712
Tssr137713 16 23317571 to 23317582 11 + TSS region transcription start site region 137713
Tssr137714 16 23317600 to 23317632 32 + TSS region transcription start site region 137714
Tssr137715 16 23317637 to 23317644 7 + TSS region transcription start site region 137715
Tssr137716 16 23320797 to 23320805 8 + TSS region transcription start site region 137716
Tssr137717 16 23320837 to 23320843 6 + TSS region transcription start site region 137717
Tssr137718 16 23320863 to 23320876 13 + TSS region transcription start site region 137718
Gm30814 16 23325821 to 23327435 1614 - lncRNA gene predicted gene, 30814
Tssr140556 16 23375057 to 23375063 6 - TSS region transcription start site region 140556
Tssr137719 16 23375223 to 23375255 32 + TSS region transcription start site region 137719
Tssr137720 16 23387520 to 23387552 32 + TSS region transcription start site region 137720
Gm23430 16 23423422 to 23423735 313 - unclassified non-coding RNA gene predicted gene, 23430
Gm23066 16 23425651 to 23425721 70 + snRNA gene predicted gene, 23066
Rtp1 16 23429133 to 23433960 4827 + protein coding gene receptor transporter protein 1
Cpgi8119 16 23431122 to 23431588 466 CpG island CpG island 8119