Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22421106-22701120

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Etv5 16 22381313 to 22439570 58257 - protein coding gene ets variant 5
Cpgi8109 16 22432068 to 22432236 168 CpG island CpG island 8109
Tssr140479 16 22436550 to 22436565 15 - TSS region transcription start site region 140479
Cpgi8110 16 22438430 to 22440592 2162 CpG island CpG island 8110
Tssr140480 16 22439581 to 22439603 22 - TSS region transcription start site region 140480
Tssr140481 16 22439608 to 22439625 17 - TSS region transcription start site region 140481
Tssr140482 16 22439731 to 22439733 2 - TSS region transcription start site region 140482
Tssr137546 16 22439951 to 22439965 14 + TSS region transcription start site region 137546
Dgkg 16 22468461 to 22657221 188760 - protein coding gene diacylglycerol kinase, gamma
Tssr140483 16 22469263 to 22469280 17 - TSS region transcription start site region 140483
Tssr140484 16 22504685 to 22504693 8 - TSS region transcription start site region 140484
9230117E06Rik 16 22511480 to 22517681 6201 + antisense lncRNA gene RIKEN cDNA 9230117E06 gene
Tssr137547 16 22515007 to 22515024 17 + TSS region transcription start site region 137547
Gm30251 16 22528218 to 22528784 566 + pseudogene predicted gene, 30251
Mir8095 16 22532056 to 22532184 128 - miRNA gene microRNA 8095
Gm9525 16 22535028 to 22535297 269 - pseudogene predicted gene 9525
Tssr140485 16 22535391 to 22535397 6 - TSS region transcription start site region 140485
Gm49565 16 22540473 to 22543886 3413 + unclassified gene predicted gene, 49565
Tssr137548 16 22546954 to 22546990 36 + TSS region transcription start site region 137548
Gm15651 16 22548553 to 22551149 2596 + antisense lncRNA gene predicted gene 15651
Tssr140486 16 22561061 to 22561083 22 - TSS region transcription start site region 140486
Tssr140487 16 22561106 to 22561120 14 - TSS region transcription start site region 140487
Cpgi8111 16 22572568 to 22573090 522 CpG island CpG island 8111
Gm41433 16 22584409 to 22590154 5745 + lncRNA gene predicted gene, 41433
Gm22481 16 22595029 to 22595220 191 + unclassified non-coding RNA gene predicted gene, 22481
Mir6362 16 22605326 to 22605432 106 + miRNA gene microRNA 6362
D16Mit98 16 22610972 to 22611082 110 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 98
D16Mit98.2 16 22611063 to 22611225 162 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 98.2
Tssr4816 16 22617995 to 22618032 37 - TSS region transcription start site region 4816
Tssr140488 16 22622296 to 22622310 14 - TSS region transcription start site region 140488
Tssr140489 16 22622321 to 22622333 12 - TSS region transcription start site region 140489
Tssr4817 16 22654650 to 22654668 18 + TSS region transcription start site region 4817
Cpgi8112 16 22656578 to 22657491 913 CpG island CpG island 8112
Tssr140490 16 22657009 to 22657045 36 - TSS region transcription start site region 140490
Tssr140491 16 22657067 to 22657079 12 - TSS region transcription start site region 140491
Tssr140492 16 22657084 to 22657096 12 - TSS region transcription start site region 140492
Tssr140493 16 22657165 to 22657178 13 - TSS region transcription start site region 140493
Tssr140494 16 22657182 to 22657242 60 - TSS region transcription start site region 140494
Tssr140495 16 22657248 to 22657260 12 - TSS region transcription start site region 140495
Gm8118 16 22685350 to 22686194 844 - pseudogene predicted gene 8118