Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22417248-22897260

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100 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Etv5 16 22381313 to 22439570 58257 - protein coding gene ets variant 5
Cpgi8109 16 22432068 to 22432236 168 CpG island CpG island 8109
Tssr140479 16 22436550 to 22436565 15 - TSS region transcription start site region 140479
Cpgi8110 16 22438430 to 22440592 2162 CpG island CpG island 8110
Tssr140480 16 22439581 to 22439603 22 - TSS region transcription start site region 140480
Tssr140481 16 22439608 to 22439625 17 - TSS region transcription start site region 140481
Tssr140482 16 22439731 to 22439733 2 - TSS region transcription start site region 140482
Tssr137546 16 22439951 to 22439965 14 + TSS region transcription start site region 137546
Dgkg 16 22468461 to 22657221 188760 - protein coding gene diacylglycerol kinase, gamma
Tssr140483 16 22469263 to 22469280 17 - TSS region transcription start site region 140483
Tssr140484 16 22504685 to 22504693 8 - TSS region transcription start site region 140484
9230117E06Rik 16 22511480 to 22517681 6201 + antisense lncRNA gene RIKEN cDNA 9230117E06 gene
Tssr137547 16 22515007 to 22515024 17 + TSS region transcription start site region 137547
Gm30251 16 22528218 to 22528784 566 + pseudogene predicted gene, 30251
Mir8095 16 22532056 to 22532184 128 - miRNA gene microRNA 8095
Gm9525 16 22535028 to 22535297 269 - pseudogene predicted gene 9525
Tssr140485 16 22535391 to 22535397 6 - TSS region transcription start site region 140485
Gm49565 16 22540473 to 22543886 3413 + unclassified gene predicted gene, 49565
Tssr137548 16 22546954 to 22546990 36 + TSS region transcription start site region 137548
Gm15651 16 22548553 to 22551149 2596 + antisense lncRNA gene predicted gene 15651
Tssr140486 16 22561061 to 22561083 22 - TSS region transcription start site region 140486
Tssr140487 16 22561106 to 22561120 14 - TSS region transcription start site region 140487
Cpgi8111 16 22572568 to 22573090 522 CpG island CpG island 8111
Gm41433 16 22584409 to 22590154 5745 + lncRNA gene predicted gene, 41433
Gm22481 16 22595029 to 22595220 191 + unclassified non-coding RNA gene predicted gene, 22481
Mir6362 16 22605326 to 22605432 106 + miRNA gene microRNA 6362
D16Mit98 16 22610972 to 22611082 110 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 98
D16Mit98.2 16 22611063 to 22611225 162 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 98.2
Tssr4816 16 22617995 to 22618032 37 - TSS region transcription start site region 4816
Tssr140488 16 22622296 to 22622310 14 - TSS region transcription start site region 140488
Tssr140489 16 22622321 to 22622333 12 - TSS region transcription start site region 140489
Tssr4817 16 22654650 to 22654668 18 + TSS region transcription start site region 4817
Cpgi8112 16 22656578 to 22657491 913 CpG island CpG island 8112
Tssr140490 16 22657009 to 22657045 36 - TSS region transcription start site region 140490
Tssr140491 16 22657067 to 22657079 12 - TSS region transcription start site region 140491
Tssr140492 16 22657084 to 22657096 12 - TSS region transcription start site region 140492
Tssr140493 16 22657165 to 22657178 13 - TSS region transcription start site region 140493
Tssr140494 16 22657182 to 22657242 60 - TSS region transcription start site region 140494
Tssr140495 16 22657248 to 22657260 12 - TSS region transcription start site region 140495
Gm8118 16 22685350 to 22686194 844 - pseudogene predicted gene 8118
Gm30416 16 22792290 to 22812206 19916 + lncRNA gene predicted gene, 30416
Crygs 16 22805203 to 22811410 6207 - protein coding gene crystallin, gamma S
Tssr140496 16 22811399 to 22811413 14 - TSS region transcription start site region 140496
Tbccd1 16 22813214 to 22857669 44455 - protein coding gene TBCC domain containing 1
Cpgi8113 16 22844306 to 22844802 496 CpG island CpG island 8113
Cpgi8114 16 22857285 to 22858328 1043 CpG island CpG island 8114
Tssr140497 16 22857436 to 22857462 26 - TSS region transcription start site region 140497
Tssr140498 16 22857491 to 22857505 14 - TSS region transcription start site region 140498
Tssr140499 16 22857514 to 22857576 62 - TSS region transcription start site region 140499
Dnajb11 16 22857845 to 22879634 21789 + protein coding gene DnaJ heat shock protein family (Hsp40) member B11
Tssr137549 16 22857847 to 22857914 67 + TSS region transcription start site region 137549
Tssr137550 16 22857916 to 22857927 11 + TSS region transcription start site region 137550
Tssr137551 16 22871698 to 22871736 38 + TSS region transcription start site region 137551
Gm30505 16 22874983 to 22894386 19403 - antisense lncRNA gene predicted gene, 30505
Tssr137552 16 22878959 to 22878992 33 + TSS region transcription start site region 137552
Tssr137553 16 22880259 to 22880266 7 + TSS region transcription start site region 137553
Tssr137554 16 22884275 to 22884282 7 + TSS region transcription start site region 137554
Tssr140500 16 22887072 to 22887098 26 - TSS region transcription start site region 140500
Tssr137555 16 22891325 to 22891334 9 + TSS region transcription start site region 137555
Tssr137556 16 22891385 to 22891395 10 + TSS region transcription start site region 137556
Ahsg 16 22892015 to 22899451 7436 + protein coding gene alpha-2-HS-glycoprotein
Tssr137557 16 22892035 to 22892051 16 + TSS region transcription start site region 137557
Tssr140501 16 22892132 to 22892149 17 - TSS region transcription start site region 140501
Tssr140502 16 22892223 to 22892295 72 - TSS region transcription start site region 140502
Tssr140503 16 22892320 to 22892333 13 - TSS region transcription start site region 140503
Tssr137558 16 22892550 to 22892581 31 + TSS region transcription start site region 137558
Tssr137559 16 22892750 to 22892777 27 + TSS region transcription start site region 137559
Tssr137560 16 22892778 to 22892820 42 + TSS region transcription start site region 137560
Tssr4818 16 22892821 to 22892824 3 + TSS region transcription start site region 4818
Tssr137561 16 22892842 to 22892845 3 + TSS region transcription start site region 137561
Tssr137562 16 22893164 to 22893171 7 + TSS region transcription start site region 137562
Tssr137563 16 22894229 to 22894241 12 + TSS region transcription start site region 137563
Tssr137564 16 22894248 to 22894271 23 + TSS region transcription start site region 137564
Tssr137565 16 22894313 to 22894408 95 + TSS region transcription start site region 137565
Tssr140504 16 22894350 to 22894392 42 - TSS region transcription start site region 140504
Tssr137566 16 22894412 to 22894417 5 + TSS region transcription start site region 137566
Tssr140505 16 22894423 to 22894441 18 - TSS region transcription start site region 140505
Tssr137567 16 22894777 to 22894785 8 + TSS region transcription start site region 137567
Tssr137568 16 22894796 to 22894816 20 + TSS region transcription start site region 137568
Tssr137569 16 22894827 to 22894837 10 + TSS region transcription start site region 137569
Tssr140506 16 22894830 to 22894861 31 - TSS region transcription start site region 140506
Tssr137570 16 22894842 to 22894854 12 + TSS region transcription start site region 137570
Tssr137571 16 22895176 to 22895192 16 + TSS region transcription start site region 137571
Tssr137572 16 22895199 to 22895291 92 + TSS region transcription start site region 137572
Tssr140507 16 22895213 to 22895224 11 - TSS region transcription start site region 140507
Tssr140508 16 22895257 to 22895266 9 - TSS region transcription start site region 140508
Tssr140509 16 22895276 to 22895284 8 - TSS region transcription start site region 140509
Tssr140510 16 22895291 to 22895332 41 - TSS region transcription start site region 140510
Tssr137573 16 22895293 to 22895301 8 + TSS region transcription start site region 137573
Tssr137574 16 22895314 to 22895320 6 + TSS region transcription start site region 137574
Tssr137575 16 22895320 to 22895330 10 + TSS region transcription start site region 137575
Tssr4819 16 22895331 to 22895341 10 + TSS region transcription start site region 4819
Tssr140511 16 22895334 to 22895346 12 - TSS region transcription start site region 140511
Tssr4820 16 22895947 to 22895957 10 + TSS region transcription start site region 4820
Tssr137576 16 22896000 to 22896015 15 + TSS region transcription start site region 137576
Tssr137577 16 22896422 to 22896432 10 + TSS region transcription start site region 137577
Tssr137578 16 22896493 to 22896576 83 + TSS region transcription start site region 137578
Tssr140512 16 22896557 to 22896566 9 - TSS region transcription start site region 140512
Tssr140513 16 22896568 to 22896599 31 - TSS region transcription start site region 140513
Tssr140514 16 22896601 to 22896614 13 - TSS region transcription start site region 140514