Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22051361-22274005

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8105 16 22053439 to 22053711 272 CpG island CpG island 8105
Ndufa11b 16 22053510 to 22053933 423 + pseudogene NADH:ubiquinone oxidoreductase subunit A11B
Tssr137535 16 22053664 to 22053702 38 + TSS region transcription start site region 137535
Tssr137536 16 22059007 to 22059016 9 + TSS region transcription start site region 137536
Igf2bp2 16 22059009 to 22163299 104290 - protein coding gene insulin-like growth factor 2 mRNA binding protein 2
Tssr140448 16 22059860 to 22059877 17 - TSS region transcription start site region 140448
Tssr140449 16 22060036 to 22060076 40 - TSS region transcription start site region 140449
Tssr140450 16 22060142 to 22060155 13 - TSS region transcription start site region 140450
Tssr140451 16 22069257 to 22069260 3 - TSS region transcription start site region 140451
Tssr140452 16 22076105 to 22076126 21 - TSS region transcription start site region 140452
Tssr137537 16 22096001 to 22096012 11 + TSS region transcription start site region 137537
Tssr137538 16 22096023 to 22096069 46 + TSS region transcription start site region 137538
Cpgi8106 16 22119493 to 22119829 336 CpG island CpG island 8106
Tssr137539 16 22119809 to 22119822 13 + TSS region transcription start site region 137539
Tssr140453 16 22121268 to 22121285 17 - TSS region transcription start site region 140453
Tssr140454 16 22121302 to 22121332 30 - TSS region transcription start site region 140454
Cpgi8107 16 22161361 to 22164005 2644 CpG island CpG island 8107
Tssr140455 16 22162939 to 22163056 117 - TSS region transcription start site region 140455
Tssr140456 16 22163721 to 22163749 28 - TSS region transcription start site region 140456
Gm25810 16 22224244 to 22224351 107 + snRNA gene predicted gene, 25810
Tssr137540 16 22230334 to 22230384 50 + TSS region transcription start site region 137540
Gm5809 16 22230391 to 22230918 527 + pseudogene predicted pseudogene 5809
Gm26980 16 22236921 to 22237315 394 + pseudogene predicted gene, 26980
Gm36796 16 22244168 to 22244472 304 + pseudogene predicted gene, 36796
Tra2b 16 22245741 to 22266000 20259 - protein coding gene transformer 2 beta
Tssr140457 16 22246872 to 22246875 3 - TSS region transcription start site region 140457
Tssr140458 16 22251820 to 22251831 11 - TSS region transcription start site region 140458
Tssr140459 16 22252383 to 22252387 4 - TSS region transcription start site region 140459
Tssr140460 16 22257826 to 22257833 7 - TSS region transcription start site region 140460
D16Ertd266e 16 22259253 to 22259459 206 DNA segment DNA segment, Chr 16, ERATO Doi 266, expressed
Tssr140461 16 22261077 to 22261081 4 - TSS region transcription start site region 140461
Tssr140462 16 22261756 to 22261763 7 - TSS region transcription start site region 140462
Cpgi8108 16 22264971 to 22266522 1551 CpG island CpG island 8108
Tssr140463 16 22265533 to 22265535 2 - TSS region transcription start site region 140463
Tssr137541 16 22265558 to 22265565 7 + TSS region transcription start site region 137541
Tssr137542 16 22265566 to 22265586 20 + TSS region transcription start site region 137542
Tssr140464 16 22265920 to 22265949 29 - TSS region transcription start site region 140464
Tssr140465 16 22265950 to 22265961 11 - TSS region transcription start site region 140465
Tssr137543 16 22266073 to 22266115 42 + TSS region transcription start site region 137543