Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:21985566-22545586

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Liph 16 21953817 to 21995658 41841 - protein coding gene lipase, member H
Cpgi8103 16 21995322 to 21995536 214 CpG island CpG island 8103
Tssr140444 16 21995389 to 21995392 3 - TSS region transcription start site region 140444
Tssr140445 16 21995455 to 21995472 17 - TSS region transcription start site region 140445
Tssr140446 16 21995478 to 21995517 39 - TSS region transcription start site region 140446
Tssr140447 16 21995539 to 21995548 9 - TSS region transcription start site region 140447
Cpgi8104 16 22009043 to 22010146 1103 CpG island CpG island 8104
Tssr137530 16 22009450 to 22009466 16 + TSS region transcription start site region 137530
Tssr137531 16 22009471 to 22009543 72 + TSS region transcription start site region 137531
Senp2 16 22009484 to 22049269 39785 + protein coding gene SUMO/sentrin specific peptidase 2
Tssr137532 16 22009766 to 22009825 59 + TSS region transcription start site region 137532
Tssr137533 16 22023801 to 22023816 15 + TSS region transcription start site region 137533
Tssr137534 16 22047592 to 22047599 7 + TSS region transcription start site region 137534
Cpgi8105 16 22053439 to 22053711 272 CpG island CpG island 8105
Ndufa11b 16 22053510 to 22053933 423 + pseudogene NADH:ubiquinone oxidoreductase subunit A11B
Tssr137535 16 22053664 to 22053702 38 + TSS region transcription start site region 137535
Tssr137536 16 22059007 to 22059016 9 + TSS region transcription start site region 137536
Igf2bp2 16 22059009 to 22163299 104290 - protein coding gene insulin-like growth factor 2 mRNA binding protein 2
Tssr140448 16 22059860 to 22059877 17 - TSS region transcription start site region 140448
Tssr140449 16 22060036 to 22060076 40 - TSS region transcription start site region 140449
Tssr140450 16 22060142 to 22060155 13 - TSS region transcription start site region 140450
Tssr140451 16 22069257 to 22069260 3 - TSS region transcription start site region 140451
Tssr140452 16 22076105 to 22076126 21 - TSS region transcription start site region 140452
Tssr137537 16 22096001 to 22096012 11 + TSS region transcription start site region 137537
Tssr137538 16 22096023 to 22096069 46 + TSS region transcription start site region 137538
Cpgi8106 16 22119493 to 22119829 336 CpG island CpG island 8106
Tssr137539 16 22119809 to 22119822 13 + TSS region transcription start site region 137539
Tssr140453 16 22121268 to 22121285 17 - TSS region transcription start site region 140453
Tssr140454 16 22121302 to 22121332 30 - TSS region transcription start site region 140454
Cpgi8107 16 22161361 to 22164005 2644 CpG island CpG island 8107
Tssr140455 16 22162939 to 22163056 117 - TSS region transcription start site region 140455
Tssr140456 16 22163721 to 22163749 28 - TSS region transcription start site region 140456
Gm25810 16 22224244 to 22224351 107 + snRNA gene predicted gene, 25810
Tssr137540 16 22230334 to 22230384 50 + TSS region transcription start site region 137540
Gm5809 16 22230391 to 22230918 527 + pseudogene predicted pseudogene 5809
Gm26980 16 22236921 to 22237315 394 + pseudogene predicted gene, 26980
Gm36796 16 22244168 to 22244472 304 + pseudogene predicted gene, 36796
Tra2b 16 22245741 to 22266000 20259 - protein coding gene transformer 2 beta
Tssr140457 16 22246872 to 22246875 3 - TSS region transcription start site region 140457
Tssr140458 16 22251820 to 22251831 11 - TSS region transcription start site region 140458
Tssr140459 16 22252383 to 22252387 4 - TSS region transcription start site region 140459
Tssr140460 16 22257826 to 22257833 7 - TSS region transcription start site region 140460
D16Ertd266e 16 22259253 to 22259459 206 DNA segment DNA segment, Chr 16, ERATO Doi 266, expressed
Tssr140461 16 22261077 to 22261081 4 - TSS region transcription start site region 140461
Tssr140462 16 22261756 to 22261763 7 - TSS region transcription start site region 140462
Cpgi8108 16 22264971 to 22266522 1551 CpG island CpG island 8108
Tssr140463 16 22265533 to 22265535 2 - TSS region transcription start site region 140463
Tssr137541 16 22265558 to 22265565 7 + TSS region transcription start site region 137541
Tssr137542 16 22265566 to 22265586 20 + TSS region transcription start site region 137542
Tssr140464 16 22265920 to 22265949 29 - TSS region transcription start site region 140464
Tssr140465 16 22265950 to 22265961 11 - TSS region transcription start site region 140465
Tssr137543 16 22266073 to 22266115 42 + TSS region transcription start site region 137543
Tssr137544 16 22294971 to 22294973 2 + TSS region transcription start site region 137544
Gng5-ps 16 22295027 to 22295231 204 + pseudogene G protein subunit gamma 5, pseudogene
Gm49582 16 22296138 to 22305603 9465 + pseudogene predicted gene, 49582
Etv5 16 22381313 to 22439570 58257 - protein coding gene ets variant 5
Tssr140466 16 22402574 to 22402601 27 - TSS region transcription start site region 140466
Tssr140467 16 22402625 to 22402637 12 - TSS region transcription start site region 140467
Tssr140468 16 22402654 to 22402674 20 - TSS region transcription start site region 140468
Tssr137545 16 22402870 to 22402893 23 + TSS region transcription start site region 137545
Tssr140469 16 22406048 to 22406060 12 - TSS region transcription start site region 140469
Tssr140470 16 22406153 to 22406162 9 - TSS region transcription start site region 140470
Tssr140471 16 22411747 to 22411784 37 - TSS region transcription start site region 140471
Tssr140472 16 22411793 to 22411820 27 - TSS region transcription start site region 140472
Tssr140473 16 22411822 to 22411850 28 - TSS region transcription start site region 140473
Tssr140474 16 22411860 to 22411875 15 - TSS region transcription start site region 140474
Tssr140475 16 22411876 to 22411896 20 - TSS region transcription start site region 140475
Tssr140476 16 22411917 to 22411926 9 - TSS region transcription start site region 140476
Tssr140477 16 22412895 to 22412947 52 - TSS region transcription start site region 140477
Tssr140478 16 22412959 to 22412981 22 - TSS region transcription start site region 140478
Cpgi8109 16 22432068 to 22432236 168 CpG island CpG island 8109
Tssr140479 16 22436550 to 22436565 15 - TSS region transcription start site region 140479
Cpgi8110 16 22438430 to 22440592 2162 CpG island CpG island 8110
Tssr140480 16 22439581 to 22439603 22 - TSS region transcription start site region 140480
Tssr140481 16 22439608 to 22439625 17 - TSS region transcription start site region 140481
Tssr140482 16 22439731 to 22439733 2 - TSS region transcription start site region 140482
Tssr137546 16 22439951 to 22439965 14 + TSS region transcription start site region 137546
Dgkg 16 22468461 to 22657221 188760 - protein coding gene diacylglycerol kinase, gamma
Tssr140483 16 22469263 to 22469280 17 - TSS region transcription start site region 140483
Tssr140484 16 22504685 to 22504693 8 - TSS region transcription start site region 140484
9230117E06Rik 16 22511480 to 22517681 6201 + antisense lncRNA gene RIKEN cDNA 9230117E06 gene
Tssr137547 16 22515007 to 22515024 17 + TSS region transcription start site region 137547
Gm30251 16 22528218 to 22528784 566 + pseudogene predicted gene, 30251
Mir8095 16 22532056 to 22532184 128 - miRNA gene microRNA 8095
Gm9525 16 22535028 to 22535297 269 - pseudogene predicted gene 9525
Tssr140485 16 22535391 to 22535397 6 - TSS region transcription start site region 140485
Gm49565 16 22540473 to 22543886 3413 + unclassified gene predicted gene, 49565