Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:21292502-21498501

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm16863	16	21247499 to 21296872	49373	-	lincRNA gene	predicted gene, 16863
Tssr137509	16	21299896 to 21299901	5	+	TSS region	transcription start site region 137509
Cpgi8093	16	21310727 to 21311207	480		CpG island	CpG island 8093
Magef1	16	21331902 to 21333356	1454	-	pseudogene	melanoma antigen family F, 1
Cpgi8094	16	21332949 to 21333580	631		CpG island	CpG island 8094
Tssr140413	16	21333258 to 21333293	35	-	TSS region	transcription start site region 140413
Tssr140414	16	21333295 to 21333367	72	-	TSS region	transcription start site region 140414
Tssr137510	16	21333363 to 21333377	14	+	TSS region	transcription start site region 137510
Cpgi8095	16	21333781 to 21333965	184		CpG island	CpG island 8095
Tssr137511	16	21339955 to 21339959	4	+	TSS region	transcription start site region 137511
Tssr140415	16	21369733 to 21369763	30	-	TSS region	transcription start site region 140415
Opfdc3	16	21372939 to 21372939	0		QTL	open field distance from center 3
Gm36224	16	21389431 to 21394000	4569	+	lncRNA gene	predicted gene, 36224
Gm36150	16	21392502 to 21398501	5999	-	lncRNA gene	predicted gene, 36150
Cpgi8096	16	21422877 to 21423720	843		CpG island	CpG island 8096
Vps8	16	21423118 to 21644680	221562	+	protein coding gene	VPS8 CORVET complex subunit
Tssr137512	16	21423145 to 21423214	69	+	TSS region	transcription start site region 137512