MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:20966848-21277525

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm18770	16	21021328 to 21021842	514	+	pseudogene	predicted gene, 18770
Gm6557	16	21062213 to 21063094	881	-	protein coding gene	predicted gene 6557
Tssr140410	16	21063123 to 21063139	16	-	TSS region	transcription start site region 140410
Tssr140411	16	21063141 to 21063157	16	-	TSS region	transcription start site region 140411
Tssr140412	16	21063159 to 21063204	45	-	TSS region	transcription start site region 140412
Gm9697	16	21079670 to 21080666	996	+	pseudogene	predicted gene 9697
Gm18771	16	21121848 to 21122525	677	+	pseudogene	predicted gene, 18771
Teddm3	16	21152659 to 21153944	1285	-	protein coding gene	transmembrane epididymal family member 3
Cpgi8088	16	21204421 to 21205655	1234		CpG island	CpG island 8088
Tssr137506	16	21204748 to 21204753	5	+	TSS region	transcription start site region 137506
Tssr137507	16	21204771 to 21204787	16	+	TSS region	transcription start site region 137507
Ephb3	16	21204795 to 21223309	18514	+	protein coding gene	Eph receptor B3
Tssr137508	16	21205043 to 21205065	22	+	TSS region	transcription start site region 137508
Cpgi8089	16	21210977 to 21211410	433		CpG island	CpG island 8089
Cpgi8090	16	21214285 to 21215083	798		CpG island	CpG island 8090
Gm49750	16	21238495 to 21263159	24664	+	lincRNA gene	predicted gene, 49750
Cpgi8091	16	21246176 to 21247023	847		CpG island	CpG island 8091
Gm16863	16	21247499 to 21296872	49373	-	lincRNA gene	predicted gene, 16863
Cpgi8092	16	21248173 to 21249023	850		CpG island	CpG island 8092
Mir7680	16	21256013 to 21256066	53	-	miRNA gene	microRNA 7680