Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:19653861-20113872

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lamp3 16 19653381 to 19706365 52984 - protein coding gene lysosomal-associated membrane protein 3
Tssr140328 16 19673167 to 19673184 17 - TSS region transcription start site region 140328
Tssr140329 16 19673248 to 19673257 9 - TSS region transcription start site region 140329
Tssr140330 16 19701324 to 19701335 11 - TSS region transcription start site region 140330
Tssr140331 16 19706293 to 19706297 4 - TSS region transcription start site region 140331
Tssr140332 16 19706305 to 19706333 28 - TSS region transcription start site region 140332
Tssr140333 16 19706340 to 19706352 12 - TSS region transcription start site region 140333
Tssr140334 16 19706370 to 19706399 29 - TSS region transcription start site region 140334
Tssr140335 16 19708476 to 19708497 21 - TSS region transcription start site region 140335
Gm17799 16 19723312 to 19723978 666 + pseudogene predicted gene, 17799
Tssr140336 16 19758206 to 19758213 7 - TSS region transcription start site region 140336
Tssr137406 16 19760195 to 19760227 32 + TSS region transcription start site region 137406
Tssr137407 16 19760232 to 19760247 15 + TSS region transcription start site region 137407
B3gnt5 16 19760234 to 19772760 12526 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
Tssr137408 16 19760263 to 19760331 68 + TSS region transcription start site region 137408
Tssr137409 16 19760336 to 19760394 58 + TSS region transcription start site region 137409
Tssr137410 16 19760397 to 19760424 27 + TSS region transcription start site region 137410
Cpgi8065 16 19760593 to 19761486 893 CpG island CpG island 8065
Tssr137411 16 19760627 to 19760644 17 + TSS region transcription start site region 137411
Tssr137412 16 19760795 to 19760798 3 + TSS region transcription start site region 137412
Tssr137413 16 19760825 to 19760836 11 + TSS region transcription start site region 137413
Tssr137414 16 19760902 to 19760909 7 + TSS region transcription start site region 137414
Tssr137415 16 19761963 to 19761969 6 + TSS region transcription start site region 137415
Tssr137416 16 19765061 to 19765066 5 + TSS region transcription start site region 137416
Gm49597 16 19852455 to 19852767 312 - pseudogene predicted gene, 49597
Tssr140337 16 19873099 to 19873102 3 - TSS region transcription start site region 140337
A930003A15Rik 16 19876567 to 19884274 7707 - lincRNA gene RIKEN cDNA A930003A15 gene
Gm49598 16 19883504 to 19884284 780 + lincRNA gene predicted gene, 49598
Tssr140338 16 19883782 to 19883806 24 - TSS region transcription start site region 140338
Gm27883 16 19883799 to 19883900 101 - miRNA gene predicted gene, 27883
Tssr4807 16 19883824 to 19883831 7 - TSS region transcription start site region 4807
Tssr140339 16 19883861 to 19883872 11 - TSS region transcription start site region 140339
Tssr140340 16 19883873 to 19883915 42 - TSS region transcription start site region 140340
Tssr140341 16 19884231 to 19884252 21 - TSS region transcription start site region 140341
Tssr140342 16 19884267 to 19884285 18 - TSS region transcription start site region 140342
Tssr140343 16 19918288 to 19918293 5 - TSS region transcription start site region 140343
Klhl6 16 19946496 to 19983037 36541 - protein coding gene kelch-like 6
Tssr4808 16 19968176 to 19968181 5 - TSS region transcription start site region 4808
Tssr140344 16 19982959 to 19982964 5 - TSS region transcription start site region 140344
Tssr140345 16 19983005 to 19983029 24 - TSS region transcription start site region 140345
Tssr140346 16 19983031 to 19983037 6 - TSS region transcription start site region 140346
Tssr140347 16 19983052 to 19983067 15 - TSS region transcription start site region 140347
Tssr4809 16 19983112 to 19983117 5 - TSS region transcription start site region 4809
D16Mit144 16 20032633 to 20032782 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 144
Cpgi8066 16 20097404 to 20098447 1043 CpG island CpG island 8066
Klhl24 16 20097542 to 20129221 31679 + protein coding gene kelch-like 24
Tssr137417 16 20097555 to 20097596 41 + TSS region transcription start site region 137417
Tssr137418 16 20097603 to 20097615 12 + TSS region transcription start site region 137418
Tssr140348 16 20098080 to 20098101 21 - TSS region transcription start site region 140348
Tssr137419 16 20107537 to 20107560 23 + TSS region transcription start site region 137419
Tssr137420 16 20112504 to 20112517 13 + TSS region transcription start site region 137420