Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18626715-18839266

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sept5 16 18621811 to 18629938 8127 - protein coding gene septin 5
Cpgi8056 16 18625814 to 18627096 1282 CpG island CpG island 8056
Cpgi8057 16 18629055 to 18630538 1483 CpG island CpG island 8057
Tssr140281 16 18629793 to 18629806 13 - TSS region transcription start site region 140281
Tssr140282 16 18629864 to 18629951 87 - TSS region transcription start site region 140282
Tssr140283 16 18629960 to 18629971 11 - TSS region transcription start site region 140283
Tssr140284 16 18630093 to 18630139 46 - TSS region transcription start site region 140284
Rps2-ps7 16 18681337 to 18682216 879 - pseudogene ribosomal protein S2, pseudogene 7
Cpgi8058 16 18682085 to 18682314 229 CpG island CpG island 8058
Cpgi8059 16 18686969 to 18687205 236 CpG island CpG island 8059
Gm41429 16 18696660 to 18718994 22334 + lncRNA gene predicted gene, 41429
Gm41428 16 18731715 to 18734266 2551 + lncRNA gene predicted gene, 41428
Tssr140285 16 18733151 to 18733193 42 - TSS region transcription start site region 140285
Tssr140286 16 18733222 to 18733246 24 - TSS region transcription start site region 140286
Tssr137383 16 18776100 to 18776139 39 + TSS region transcription start site region 137383
Tssr140287 16 18776648 to 18776681 33 - TSS region transcription start site region 140287
Tssr137384 16 18776839 to 18776856 17 + TSS region transcription start site region 137384
Del(16Cldn5-Hira)5Bld 16 18776847 to 18970309 193462 complex/cluster/region deletion, Chr 16, Antonio Baldini 5
Cldn5 16 18776847 to 18778262 1415 + protein coding gene claudin 5
Cpgi8060 16 18776877 to 18777955 1078 CpG island CpG island 8060
Cdc45 16 18780447 to 18811987 31540 - protein coding gene cell division cycle 45
Tssr140288 16 18784309 to 18784313 4 - TSS region transcription start site region 140288
Cpgi8061 16 18811317 to 18812701 1384 CpG island CpG island 8061
Tssr140289 16 18811584 to 18811609 25 - TSS region transcription start site region 140289
Tssr140290 16 18811615 to 18811635 20 - TSS region transcription start site region 140290
Tssr140291 16 18811638 to 18811643 5 - TSS region transcription start site region 140291
Tssr137385 16 18811772 to 18811787 15 + TSS region transcription start site region 137385
Ufd1 16 18811819 to 18835261 23442 + protein coding gene ubiquitin recognition factor in ER-associated degradation 1
Tssr140292 16 18812003 to 18812025 22 - TSS region transcription start site region 140292
Tssr137386 16 18812286 to 18812336 50 + TSS region transcription start site region 137386
D630030B22Rik 16 18829324 to 18831490 2166 unclassified gene RIKEN cDNA D630030B22 gene
9430099O15Rik 16 18831431 to 18833449 2018 unclassified gene RIKEN cDNA 9430099O15 gene
Tssr137387 16 18832176 to 18832183 7 + TSS region transcription start site region 137387
Cpgi8062 16 18836455 to 18837020 565 CpG island CpG island 8062
Tssr137388 16 18836573 to 18836583 10 + TSS region transcription start site region 137388
2510002D24Rik 16 18836580 to 18840113 3533 + protein coding gene RIKEN cDNA 2510002D24 gene
Gm28539 16 18836584 to 18956247 119663 + protein coding gene predicted gene 28539