Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18596660-18818994

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930588K23Rik 16 18606662 to 18610659 3997 + lincRNA gene RIKEN cDNA 4930588K23 gene
Cpgi8053 16 18617473 to 18617998 525 CpG island CpG island 8053
Gp1bb 16 18620319 to 18622403 2084 - protein coding gene glycoprotein Ib, beta polypeptide
Gm49601 16 18620466 to 18626427 5961 - protein coding gene predicted gene, 49601
Cpgi8054 16 18620495 to 18622203 1708 CpG island CpG island 8054
Tssr140272 16 18621604 to 18621615 11 - TSS region transcription start site region 140272
Tssr140273 16 18621622 to 18621637 15 - TSS region transcription start site region 140273
Tssr140274 16 18621639 to 18621669 30 - TSS region transcription start site region 140274
Sept5 16 18621811 to 18629938 8127 - protein coding gene septin 5
Tssr140275 16 18621993 to 18622020 27 - TSS region transcription start site region 140275
Cpgi8055 16 18623172 to 18623351 179 CpG island CpG island 8055
Tssr140276 16 18623347 to 18623350 3 - TSS region transcription start site region 140276
Cpgi8056 16 18625814 to 18627096 1282 CpG island CpG island 8056
Tssr140277 16 18626396 to 18626414 18 - TSS region transcription start site region 140277
Tssr140278 16 18626423 to 18626461 38 - TSS region transcription start site region 140278
Tssr140279 16 18626671 to 18626681 10 - TSS region transcription start site region 140279
Tssr140280 16 18626693 to 18626702 9 - TSS region transcription start site region 140280
Cpgi8057 16 18629055 to 18630538 1483 CpG island CpG island 8057
Tssr140281 16 18629793 to 18629806 13 - TSS region transcription start site region 140281
Tssr140282 16 18629864 to 18629951 87 - TSS region transcription start site region 140282
Tssr140283 16 18629960 to 18629971 11 - TSS region transcription start site region 140283
Tssr140284 16 18630093 to 18630139 46 - TSS region transcription start site region 140284
Rps2-ps7 16 18681337 to 18682216 879 - pseudogene ribosomal protein S2, pseudogene 7
Cpgi8058 16 18682085 to 18682314 229 CpG island CpG island 8058
Cpgi8059 16 18686969 to 18687205 236 CpG island CpG island 8059
Gm41429 16 18696660 to 18718994 22334 + lncRNA gene predicted gene, 41429
Gm41428 16 18731715 to 18734266 2551 + lncRNA gene predicted gene, 41428
Tssr140285 16 18733151 to 18733193 42 - TSS region transcription start site region 140285
Tssr140286 16 18733222 to 18733246 24 - TSS region transcription start site region 140286
Tssr137383 16 18776100 to 18776139 39 + TSS region transcription start site region 137383
Tssr140287 16 18776648 to 18776681 33 - TSS region transcription start site region 140287
Tssr137384 16 18776839 to 18776856 17 + TSS region transcription start site region 137384
Cldn5 16 18776847 to 18778262 1415 + protein coding gene claudin 5
Del(16Cldn5-Hira)5Bld 16 18776847 to 18970309 193462 complex/cluster/region deletion, Chr 16, Antonio Baldini 5
Cpgi8060 16 18776877 to 18777955 1078 CpG island CpG island 8060
Cdc45 16 18780447 to 18811987 31540 - protein coding gene cell division cycle 45
Tssr140288 16 18784309 to 18784313 4 - TSS region transcription start site region 140288
Cpgi8061 16 18811317 to 18812701 1384 CpG island CpG island 8061
Tssr140289 16 18811584 to 18811609 25 - TSS region transcription start site region 140289
Tssr140290 16 18811615 to 18811635 20 - TSS region transcription start site region 140290
Tssr140291 16 18811638 to 18811643 5 - TSS region transcription start site region 140291
Tssr137385 16 18811772 to 18811787 15 + TSS region transcription start site region 137385
Ufd1 16 18811819 to 18835261 23442 + protein coding gene ubiquitin recognition factor in ER-associated degradation 1
Tssr140292 16 18812003 to 18812025 22 - TSS region transcription start site region 140292
Tssr137386 16 18812286 to 18812336 50 + TSS region transcription start site region 137386