Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18448172-18798351

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Txnrd2 16 18426417 to 18479073 52656 + protein coding gene thioredoxin reductase 2
Tssr140263 16 18460047 to 18460081 34 - TSS region transcription start site region 140263
Gm49588 16 18482056 to 18486545 4489 + unclassified gene predicted gene, 49588
Cpgi8047 16 18498262 to 18499637 1375 CpG island CpG island 8047
Gnb1l 16 18498713 to 18566679 67966 + protein coding gene guanine nucleotide binding protein (G protein), beta polypeptide 1-like
Tssr137379 16 18498784 to 18498816 32 + TSS region transcription start site region 137379
Tssr137380 16 18498865 to 18498942 77 + TSS region transcription start site region 137380
Rtl10 16 18498901 to 18501658 2757 + protein coding gene retrotransposon Gag like 10
Tssr140264 16 18533331 to 18533341 10 - TSS region transcription start site region 140264
Tssr137381 16 18548714 to 18548722 8 + TSS region transcription start site region 137381
Tssr137382 16 18548730 to 18548735 5 + TSS region transcription start site region 137382
Cpgi8048 16 18581276 to 18583233 1957 CpG island CpG island 8048
Tbx1 16 18581704 to 18590671 8967 - protein coding gene T-box 1
Cpgi8049 16 18586075 to 18587294 1219 CpG island CpG island 8049
Tssr140265 16 18586893 to 18586898 5 - TSS region transcription start site region 140265
Tssr140266 16 18586959 to 18586970 11 - TSS region transcription start site region 140266
Tssr140267 16 18586983 to 18587013 30 - TSS region transcription start site region 140267
Cpgi8050 16 18587761 to 18589371 1610 CpG island CpG island 8050
Tssr140268 16 18588198 to 18588208 10 - TSS region transcription start site region 140268
Tssr140269 16 18588772 to 18588784 12 - TSS region transcription start site region 140269
Tssr140270 16 18588818 to 18588832 14 - TSS region transcription start site region 140270
Tssr140271 16 18588880 to 18588909 29 - TSS region transcription start site region 140271
Gm35369 16 18588970 to 18596251 7281 + lncRNA gene predicted gene, 35369
Cpgi8051 16 18590155 to 18591122 967 CpG island CpG island 8051
Cpgi8052 16 18591256 to 18592080 824 CpG island CpG island 8052
4930588K23Rik 16 18606662 to 18610659 3997 + lincRNA gene RIKEN cDNA 4930588K23 gene
Cpgi8053 16 18617473 to 18617998 525 CpG island CpG island 8053
Gp1bb 16 18620319 to 18622403 2084 - protein coding gene glycoprotein Ib, beta polypeptide
Gm49601 16 18620466 to 18626427 5961 - protein coding gene predicted gene, 49601
Cpgi8054 16 18620495 to 18622203 1708 CpG island CpG island 8054
Tssr140272 16 18621604 to 18621615 11 - TSS region transcription start site region 140272
Tssr140273 16 18621622 to 18621637 15 - TSS region transcription start site region 140273
Tssr140274 16 18621639 to 18621669 30 - TSS region transcription start site region 140274
Sept5 16 18621811 to 18629938 8127 - protein coding gene septin 5
Tssr140275 16 18621993 to 18622020 27 - TSS region transcription start site region 140275
Cpgi8055 16 18623172 to 18623351 179 CpG island CpG island 8055
Tssr140276 16 18623347 to 18623350 3 - TSS region transcription start site region 140276
Cpgi8056 16 18625814 to 18627096 1282 CpG island CpG island 8056
Tssr140277 16 18626396 to 18626414 18 - TSS region transcription start site region 140277
Tssr140278 16 18626423 to 18626461 38 - TSS region transcription start site region 140278
Tssr140279 16 18626671 to 18626681 10 - TSS region transcription start site region 140279
Tssr140280 16 18626693 to 18626702 9 - TSS region transcription start site region 140280
Cpgi8057 16 18629055 to 18630538 1483 CpG island CpG island 8057
Tssr140281 16 18629793 to 18629806 13 - TSS region transcription start site region 140281
Tssr140282 16 18629864 to 18629951 87 - TSS region transcription start site region 140282
Tssr140283 16 18629960 to 18629971 11 - TSS region transcription start site region 140283
Tssr140284 16 18630093 to 18630139 46 - TSS region transcription start site region 140284
Rps2-ps7 16 18681337 to 18682216 879 - pseudogene ribosomal protein S2, pseudogene 7
Cpgi8058 16 18682085 to 18682314 229 CpG island CpG island 8058
Cpgi8059 16 18686969 to 18687205 236 CpG island CpG island 8059
Gm41429 16 18696660 to 18718994 22334 + lncRNA gene predicted gene, 41429
Gm41428 16 18731715 to 18734266 2551 + lncRNA gene predicted gene, 41428
Tssr140285 16 18733151 to 18733193 42 - TSS region transcription start site region 140285
Tssr140286 16 18733222 to 18733246 24 - TSS region transcription start site region 140286
Tssr137383 16 18776100 to 18776139 39 + TSS region transcription start site region 137383
Tssr140287 16 18776648 to 18776681 33 - TSS region transcription start site region 140287
Tssr137384 16 18776839 to 18776856 17 + TSS region transcription start site region 137384
Del(16Cldn5-Hira)5Bld 16 18776847 to 18970309 193462 complex/cluster/region deletion, Chr 16, Antonio Baldini 5
Cldn5 16 18776847 to 18778262 1415 + protein coding gene claudin 5
Cpgi8060 16 18776877 to 18777955 1078 CpG island CpG island 8060
Cdc45 16 18780447 to 18811987 31540 - protein coding gene cell division cycle 45
Tssr140288 16 18784309 to 18784313 4 - TSS region transcription start site region 140288