Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18288310-18399252

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dgcr8 16 18253948 to 18289246 35298 - protein coding gene DGCR8, microprocessor complex subunit
Cpgi8042 16 18288629 to 18289574 945 CpG island CpG island 8042
Tssr140240 16 18289186 to 18289196 10 - TSS region transcription start site region 140240
Tssr140241 16 18289199 to 18289260 61 - TSS region transcription start site region 140241
Tango2 16 18300825 to 18348098 47273 - protein coding gene transport and golgi organization 2
Mir185 16 18327401 to 18327465 64 - miRNA gene microRNA 185
9530053J19Rik 16 18332689 to 18334717 2028 unclassified gene RIKEN cDNA 9530053J19 gene
Cpgi8043 16 18343310 to 18344252 942 CpG island CpG island 8043
Tssr140242 16 18343882 to 18343932 50 - TSS region transcription start site region 140242
Cpgi8044 16 18347887 to 18349021 1134 CpG island CpG island 8044
Tssr140243 16 18348013 to 18348088 75 - TSS region transcription start site region 140243
Tssr137367 16 18348181 to 18348273 92 + TSS region transcription start site region 137367
Arvcf 16 18348182 to 18407076 58894 + protein coding gene armadillo repeat gene deleted in velocardiofacial syndrome
Tssr137368 16 18348341 to 18348352 11 + TSS region transcription start site region 137368
Gm26170 16 18355616 to 18355763 147 + snRNA gene predicted gene, 26170
Gm26219 16 18361436 to 18361506 70 - miRNA gene predicted gene, 26219
Tssr137369 16 18388995 to 18389043 48 + TSS region transcription start site region 137369
Cpgi8045 16 18392398 to 18393151 753 CpG island CpG island 8045
Tssr137370 16 18392554 to 18392622 68 + TSS region transcription start site region 137370
Tssr137371 16 18392631 to 18392643 12 + TSS region transcription start site region 137371