Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18278181-18418273

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 chromosomal duplication duplication, Chr 16, Arthur I Skoultchi 1
Del(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 complex/cluster/region deletion, Chr 16, Arthur I Skoultchi 1
Dgcr8 16 18253948 to 18289246 35298 - protein coding gene DGCR8, microprocessor complex subunit
Mir1306 16 18284239 to 18284317 78 - miRNA gene microRNA 1306
Gm24572 16 18284550 to 18284637 87 - miRNA gene predicted gene, 24572
Tssr140239 16 18284951 to 18284955 4 - TSS region transcription start site region 140239
Cpgi8042 16 18288629 to 18289574 945 CpG island CpG island 8042
Tssr140240 16 18289186 to 18289196 10 - TSS region transcription start site region 140240
Tssr140241 16 18289199 to 18289260 61 - TSS region transcription start site region 140241
Tango2 16 18300825 to 18348098 47273 - protein coding gene transport and golgi organization 2
Mir185 16 18327401 to 18327465 64 - miRNA gene microRNA 185
9530053J19Rik 16 18332689 to 18334717 2028 unclassified gene RIKEN cDNA 9530053J19 gene
Cpgi8043 16 18343310 to 18344252 942 CpG island CpG island 8043
Tssr140242 16 18343882 to 18343932 50 - TSS region transcription start site region 140242
Cpgi8044 16 18347887 to 18349021 1134 CpG island CpG island 8044
Tssr140243 16 18348013 to 18348088 75 - TSS region transcription start site region 140243
Tssr137367 16 18348181 to 18348273 92 + TSS region transcription start site region 137367
Arvcf 16 18348182 to 18407076 58894 + protein coding gene armadillo repeat gene deleted in velocardiofacial syndrome
Tssr137368 16 18348341 to 18348352 11 + TSS region transcription start site region 137368
Gm26170 16 18355616 to 18355763 147 + snRNA gene predicted gene, 26170
Gm26219 16 18361436 to 18361506 70 - miRNA gene predicted gene, 26219
Tssr137369 16 18388995 to 18389043 48 + TSS region transcription start site region 137369
Cpgi8045 16 18392398 to 18393151 753 CpG island CpG island 8045
Tssr137370 16 18392554 to 18392622 68 + TSS region transcription start site region 137370
Tssr137371 16 18392631 to 18392643 12 + TSS region transcription start site region 137371
Tssr140244 16 18400826 to 18400842 16 - TSS region transcription start site region 140244
Comt 16 18406882 to 18426716 19834 - protein coding gene catechol-O-methyltransferase
Tssr137372 16 18407631 to 18407688 57 + TSS region transcription start site region 137372
Tssr140245 16 18407943 to 18407957 14 - TSS region transcription start site region 140245
Tssr140246 16 18407998 to 18408024 26 - TSS region transcription start site region 140246
Tssr140247 16 18410778 to 18410800 22 - TSS region transcription start site region 140247
Tssr140248 16 18411757 to 18411764 7 - TSS region transcription start site region 140248
Tssr140249 16 18411782 to 18411878 96 - TSS region transcription start site region 140249
Tssr140250 16 18411893 to 18411904 11 - TSS region transcription start site region 140250
Tssr140251 16 18411919 to 18411930 11 - TSS region transcription start site region 140251
Tssr140252 16 18411947 to 18411964 17 - TSS region transcription start site region 140252
Tssr140253 16 18413452 to 18413467 15 - TSS region transcription start site region 140253
D16Jhu32 16 18414626 to 18415012 386 DNA segment DNA segment, Chr 16, Johns Hopkins University 32
Gm15764 16 18416682 to 18421997 5315 + lncRNA gene predicted gene 15764