Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18240825-18408098

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 complex/cluster/region deletion, Chr 16, Arthur I Skoultchi 1
Dp(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 chromosomal duplication duplication, Chr 16, Arthur I Skoultchi 1
Ranbp1 16 18239979 to 18248694 8715 - protein coding gene RAN binding protein 1
Gm25777 16 18240717 to 18240842 125 - snoRNA gene predicted gene, 25777
Gm49776 16 18245215 to 18258321 13106 - protein coding gene predicted gene, 49776
Tssr140232 16 18245225 to 18245238 13 - TSS region transcription start site region 140232
Tssr140233 16 18247366 to 18247387 21 - TSS region transcription start site region 140233
Tssr140234 16 18247404 to 18247419 15 - TSS region transcription start site region 140234
Cpgi8041 16 18248012 to 18250020 2008 CpG island CpG island 8041
Tssr140235 16 18248611 to 18248692 81 - TSS region transcription start site region 140235
Tssr140236 16 18248697 to 18248709 12 - TSS region transcription start site region 140236
Tssr140237 16 18248727 to 18248744 17 - TSS region transcription start site region 140237
Trmt2a 16 18248858 to 18254772 5914 + protein coding gene TRM2 tRNA methyltransferase 2A
Tssr137364 16 18248866 to 18248919 53 + TSS region transcription start site region 137364
Tssr137365 16 18248937 to 18248948 11 + TSS region transcription start site region 137365
Tssr137366 16 18248961 to 18249041 80 + TSS region transcription start site region 137366
Tssr140238 16 18249231 to 18249253 22 - TSS region transcription start site region 140238
Dgcr8 16 18253948 to 18289246 35298 - protein coding gene DGCR8, microprocessor complex subunit
Mir1306 16 18284239 to 18284317 78 - miRNA gene microRNA 1306
Gm24572 16 18284550 to 18284637 87 - miRNA gene predicted gene, 24572
Tssr140239 16 18284951 to 18284955 4 - TSS region transcription start site region 140239
Cpgi8042 16 18288629 to 18289574 945 CpG island CpG island 8042
Tssr140240 16 18289186 to 18289196 10 - TSS region transcription start site region 140240
Tssr140241 16 18289199 to 18289260 61 - TSS region transcription start site region 140241
Tango2 16 18300825 to 18348098 47273 - protein coding gene transport and golgi organization 2
Mir185 16 18327401 to 18327465 64 - miRNA gene microRNA 185
9530053J19Rik 16 18332689 to 18334717 2028 unclassified gene RIKEN cDNA 9530053J19 gene
Cpgi8043 16 18343310 to 18344252 942 CpG island CpG island 8043
Tssr140242 16 18343882 to 18343932 50 - TSS region transcription start site region 140242
Cpgi8044 16 18347887 to 18349021 1134 CpG island CpG island 8044
Tssr140243 16 18348013 to 18348088 75 - TSS region transcription start site region 140243
Tssr137367 16 18348181 to 18348273 92 + TSS region transcription start site region 137367
Arvcf 16 18348182 to 18407076 58894 + protein coding gene armadillo repeat gene deleted in velocardiofacial syndrome
Tssr137368 16 18348341 to 18348352 11 + TSS region transcription start site region 137368
Gm26170 16 18355616 to 18355763 147 + snRNA gene predicted gene, 26170
Gm26219 16 18361436 to 18361506 70 - miRNA gene predicted gene, 26219
Tssr137369 16 18388995 to 18389043 48 + TSS region transcription start site region 137369
Cpgi8045 16 18392398 to 18393151 753 CpG island CpG island 8045
Tssr137370 16 18392554 to 18392622 68 + TSS region transcription start site region 137370
Tssr137371 16 18392631 to 18392643 12 + TSS region transcription start site region 137371
Tssr140244 16 18400826 to 18400842 16 - TSS region transcription start site region 140244
Comt 16 18406882 to 18426716 19834 - protein coding gene catechol-O-methyltransferase
Tssr137372 16 18407631 to 18407688 57 + TSS region transcription start site region 137372
Tssr140245 16 18407943 to 18407957 14 - TSS region transcription start site region 140245
Tssr140246 16 18407998 to 18408024 26 - TSS region transcription start site region 140246