Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Del(16Dgcr2-Hira)3Aam | 16 | 1129954 | complex/cluster/region | deletion, Chr 16, Alea A Mills 3 | ||
Del(16Dgcr2-Hira)1Rak | 16 | 1129954 | complex/cluster/region | deletion, Chr 16, Raju Kucherlapati 1 | ||
Del(16Dgcr2-Arvcf)1Ais | 16 | 566721 | complex/cluster/region | deletion, Chr 16, Arthur I Skoultchi 1 | ||
Dp(16Dgcr2-Arvcf)1Ais | 16 | 566721 | chromosomal duplication | duplication, Chr 16, Arthur I Skoultchi 1 | ||
Rtn4r | 16 | 24702 | + | protein coding gene | reticulon 4 receptor | |
Tssr137358 | 16 | 12 | + | TSS region | transcription start site region 137358 | |
Mir6366 | 16 | 81 | - | miRNA gene | microRNA 6366 | |
Gm34679 | 16 | 4948 | + | lncRNA gene | predicted gene, 34679 | |
4933432I09Rik | 16 | 4177 | - | lincRNA gene | RIKEN cDNA 4933432I09 gene | |
4930483P17Rik | 16 | 1601 | + | lincRNA gene | RIKEN cDNA 4930483P17 gene | |
Tssr140230 | 16 | 16 | - | TSS region | transcription start site region 140230 | |
Tssr137359 | 16 | 7 | + | TSS region | transcription start site region 137359 | |
Tssr137360 | 16 | 10 | + | TSS region | transcription start site region 137360 | |
Tssr137361 | 16 | 41 | + | TSS region | transcription start site region 137361 | |
Tssr137362 | 16 | 11 | + | TSS region | transcription start site region 137362 | |
Ccdc188 | 16 | 2469 | + | protein coding gene | coiled-coil domain containing 188 | |
Tssr137363 | 16 | 8 | + | TSS region | transcription start site region 137363 | |
Zdhhc8 | 16 | 14383 | - | protein coding gene | zinc finger, DHHC domain containing 8 | |
Cpgi8040 | 16 | 1410 | CpG island | CpG island 8040 | ||
Tssr140231 | 16 | 110 | - | TSS region | transcription start site region 140231 | |
Ranbp1 | 16 | 8715 | - | protein coding gene | RAN binding protein 1 | |
Gm25777 | 16 | 125 | - | snoRNA gene | predicted gene, 25777 | |
Gm49776 | 16 | 13106 | - | protein coding gene | predicted gene, 49776 | |
Tssr140232 | 16 | 13 | - | TSS region | transcription start site region 140232 | |
Tssr140233 | 16 | 21 | - | TSS region | transcription start site region 140233 | |
Tssr140234 | 16 | 15 | - | TSS region | transcription start site region 140234 | |
Cpgi8041 | 16 | 2008 | CpG island | CpG island 8041 | ||
Tssr140235 | 16 | 81 | - | TSS region | transcription start site region 140235 | |
Tssr140236 | 16 | 12 | - | TSS region | transcription start site region 140236 | |
Tssr140237 | 16 | 17 | - | TSS region | transcription start site region 140237 | |
Trmt2a | 16 | 5914 | + | protein coding gene | TRM2 tRNA methyltransferase 2A | |
Tssr137364 | 16 | 53 | + | TSS region | transcription start site region 137364 | |
Tssr137365 | 16 | 11 | + | TSS region | transcription start site region 137365 | |
Tssr137366 | 16 | 80 | + | TSS region | transcription start site region 137366 | |
Tssr140238 | 16 | 22 | - | TSS region | transcription start site region 140238 | |
Dgcr8 | 16 | 35298 | - | protein coding gene | DGCR8, microprocessor complex subunit | |
Mir1306 | 16 | 78 | - | miRNA gene | microRNA 1306 | |
Gm24572 | 16 | 87 | - | miRNA gene | predicted gene, 24572 | |
Tssr140239 | 16 | 4 | - | TSS region | transcription start site region 140239 | |
Cpgi8042 | 16 | 945 | CpG island | CpG island 8042 | ||
Tssr140240 | 16 | 10 | - | TSS region | transcription start site region 140240 | |
Tssr140241 | 16 | 61 | - | TSS region | transcription start site region 140241 | |
Tango2 | 16 | 47273 | - | protein coding gene | transport and golgi organization 2 | |
Mir185 | 16 | 64 | - | miRNA gene | microRNA 185 | |
9530053J19Rik | 16 | 2028 | unclassified gene | RIKEN cDNA 9530053J19 gene | ||
Cpgi8043 | 16 | 942 | CpG island | CpG island 8043 | ||
Tssr140242 | 16 | 50 | - | TSS region | transcription start site region 140242 | |
Cpgi8044 | 16 | 1134 | CpG island | CpG island 8044 | ||
Tssr140243 | 16 | 75 | - | TSS region | transcription start site region 140243 | |
Tssr137367 | 16 | 92 | + | TSS region | transcription start site region 137367 | |
Arvcf | 16 | 58894 | + | protein coding gene | armadillo repeat gene deleted in velocardiofacial syndrome | |
Tssr137368 | 16 | 11 | + | TSS region | transcription start site region 137368 | |
Gm26170 | 16 | 147 | + | snRNA gene | predicted gene, 26170 | |
Gm26219 | 16 | 70 | - | miRNA gene | predicted gene, 26219 | |
Tssr137369 | 16 | 48 | + | TSS region | transcription start site region 137369 | |
Cpgi8045 | 16 | 753 | CpG island | CpG island 8045 | ||
Tssr137370 | 16 | 68 | + | TSS region | transcription start site region 137370 | |
Tssr137371 | 16 | 12 | + | TSS region | transcription start site region 137371 | |
Tssr140244 | 16 | 16 | - | TSS region | transcription start site region 140244 | |
Comt | 16 | 19834 | - | protein coding gene | catechol-O-methyltransferase | |
Tssr137372 | 16 | 57 | + | TSS region | transcription start site region 137372 | |
Tssr140245 | 16 | 14 | - | TSS region | transcription start site region 140245 | |
Tssr140246 | 16 | 26 | - | TSS region | transcription start site region 140246 | |
Tssr140247 | 16 | 22 | - | TSS region | transcription start site region 140247 | |
Tssr140248 | 16 | 7 | - | TSS region | transcription start site region 140248 | |
Tssr140249 | 16 | 96 | - | TSS region | transcription start site region 140249 | |
Tssr140250 | 16 | 11 | - | TSS region | transcription start site region 140250 | |
Tssr140251 | 16 | 11 | - | TSS region | transcription start site region 140251 | |
Tssr140252 | 16 | 17 | - | TSS region | transcription start site region 140252 | |
Tssr140253 | 16 | 15 | - | TSS region | transcription start site region 140253 | |
D16Jhu32 | 16 | 386 | DNA segment | DNA segment, Chr 16, Johns Hopkins University 32 | ||
Gm15764 | 16 | 5315 | + | lncRNA gene | predicted gene 15764 | |
Cpgi8046 | 16 | 728 | CpG island | CpG island 8046 | ||
Tssr140254 | 16 | 17 | - | TSS region | transcription start site region 140254 | |
Tssr140255 | 16 | 27 | - | TSS region | transcription start site region 140255 | |
Tssr137373 | 16 | 9 | + | TSS region | transcription start site region 137373 | |
Tssr137374 | 16 | 35 | + | TSS region | transcription start site region 137374 | |
Txnrd2 | 16 | 52656 | + | protein coding gene | thioredoxin reductase 2 | |
Tssr140256 | 16 | 9 | - | TSS region | transcription start site region 140256 | |
Tssr140257 | 16 | 11 | - | TSS region | transcription start site region 140257 | |
Tssr140258 | 16 | 29 | - | TSS region | transcription start site region 140258 | |
Tssr140259 | 16 | 29 | - | TSS region | transcription start site region 140259 | |
Tssr140260 | 16 | 40 | - | TSS region | transcription start site region 140260 | |
Tssr140261 | 16 | 11 | - | TSS region | transcription start site region 140261 | |
Tssr140262 | 16 | 17 | - | TSS region | transcription start site region 140262 | |
Tssr137375 | 16 | 18 | + | TSS region | transcription start site region 137375 | |
Tssr137376 | 16 | 33 | + | TSS region | transcription start site region 137376 | |
Tssr137377 | 16 | 34 | + | TSS region | transcription start site region 137377 | |
Tssr137378 | 16 | 12 | + | TSS region | transcription start site region 137378 | |
Tssr140263 | 16 | 34 | - | TSS region | transcription start site region 140263 | |
Gm49588 | 16 | 4489 | + | unclassified gene | predicted gene, 49588 | |
Cpgi8047 | 16 | 1375 | CpG island | CpG island 8047 | ||
Gnb1l | 16 | 67966 | + | protein coding gene | guanine nucleotide binding protein (G protein), beta polypeptide 1-like | |
Tssr137379 | 16 | 32 | + | TSS region | transcription start site region 137379 | |
Tssr137380 | 16 | 77 | + | TSS region | transcription start site region 137380 | |
Rtl10 | 16 | 2757 | + | protein coding gene | retrotransposon Gag like 10 | |
Tssr140264 | 16 | 10 | - | TSS region | transcription start site region 140264 | |
Tssr137381 | 16 | 8 | + | TSS region | transcription start site region 137381 | |
Tssr137382 | 16 | 5 | + | TSS region | transcription start site region 137382 | |
Cpgi8048 | 16 | 1957 | CpG island | CpG island 8048 | ||
Tbx1 | 16 | 8967 | - | protein coding gene | T-box 1 | |
Cpgi8049 | 16 | 1219 | CpG island | CpG island 8049 | ||
Tssr140265 | 16 | 5 | - | TSS region | transcription start site region 140265 | |
Tssr140266 | 16 | 11 | - | TSS region | transcription start site region 140266 | |
Tssr140267 | 16 | 30 | - | TSS region | transcription start site region 140267 | |
Cpgi8050 | 16 | 1610 | CpG island | CpG island 8050 | ||
Tssr140268 | 16 | 10 | - | TSS region | transcription start site region 140268 | |
Tssr140269 | 16 | 12 | - | TSS region | transcription start site region 140269 | |
Tssr140270 | 16 | 14 | - | TSS region | transcription start site region 140270 | |
Tssr140271 | 16 | 29 | - | TSS region | transcription start site region 140271 | |
Gm35369 | 16 | 7281 | + | lncRNA gene | predicted gene, 35369 | |
Cpgi8051 | 16 | 967 | CpG island | CpG island 8051 | ||
Cpgi8052 | 16 | 824 | CpG island | CpG island 8052 | ||
4930588K23Rik | 16 | 3997 | + | lincRNA gene | RIKEN cDNA 4930588K23 gene | |
Cpgi8053 | 16 | 525 | CpG island | CpG island 8053 | ||
Gp1bb | 16 | 2084 | - | protein coding gene | glycoprotein Ib, beta polypeptide | |
Gm49601 | 16 | 5961 | - | protein coding gene | predicted gene, 49601 | |
Cpgi8054 | 16 | 1708 | CpG island | CpG island 8054 | ||
Tssr140272 | 16 | 11 | - | TSS region | transcription start site region 140272 | |
Tssr140273 | 16 | 15 | - | TSS region | transcription start site region 140273 | |
Tssr140274 | 16 | 30 | - | TSS region | transcription start site region 140274 | |
Sept5 | 16 | 8127 | - | protein coding gene | septin 5 | |
Tssr140275 | 16 | 27 | - | TSS region | transcription start site region 140275 | |
Cpgi8055 | 16 | 179 | CpG island | CpG island 8055 | ||
Tssr140276 | 16 | 3 | - | TSS region | transcription start site region 140276 | |
Cpgi8056 | 16 | 1282 | CpG island | CpG island 8056 | ||
Tssr140277 | 16 | 18 | - | TSS region | transcription start site region 140277 | |
Tssr140278 | 16 | 38 | - | TSS region | transcription start site region 140278 | |
Tssr140279 | 16 | 10 | - | TSS region | transcription start site region 140279 | |
Tssr140280 | 16 | 9 | - | TSS region | transcription start site region 140280 | |
Cpgi8057 | 16 | 1483 | CpG island | CpG island 8057 | ||
Tssr140281 | 16 | 13 | - | TSS region | transcription start site region 140281 | |
Tssr140282 | 16 | 87 | - | TSS region | transcription start site region 140282 | |
Tssr140283 | 16 | 11 | - | TSS region | transcription start site region 140283 | |
Tssr140284 | 16 | 46 | - | TSS region | transcription start site region 140284 | |
Rps2-ps7 | 16 | 879 | - | pseudogene | ribosomal protein S2, pseudogene 7 | |
Cpgi8058 | 16 | 229 | CpG island | CpG island 8058 | ||
Cpgi8059 | 16 | 236 | CpG island | CpG island 8059 | ||
Gm41429 | 16 | 22334 | + | lncRNA gene | predicted gene, 41429 | |
Gm41428 | 16 | 2551 | + | lncRNA gene | predicted gene, 41428 | |
Tssr140285 | 16 | 42 | - | TSS region | transcription start site region 140285 | |
Tssr140286 | 16 | 24 | - | TSS region | transcription start site region 140286 | |
Tssr137383 | 16 | 39 | + | TSS region | transcription start site region 137383 | |
Tssr140287 | 16 | 33 | - | TSS region | transcription start site region 140287 | |
Tssr137384 | 16 | 17 | + | TSS region | transcription start site region 137384 | |
Del(16Cldn5-Hira)5Bld | 16 | 193462 | complex/cluster/region | deletion, Chr 16, Antonio Baldini 5 | ||
Cldn5 | 16 | 1415 | + | protein coding gene | claudin 5 | |
Cpgi8060 | 16 | 1078 | CpG island | CpG island 8060 | ||
Cdc45 | 16 | 31540 | - | protein coding gene | cell division cycle 45 | |
Tssr140288 | 16 | 4 | - | TSS region | transcription start site region 140288 | |
Cpgi8061 | 16 | 1384 | CpG island | CpG island 8061 | ||
Tssr140289 | 16 | 25 | - | TSS region | transcription start site region 140289 | |
Tssr140290 | 16 | 20 | - | TSS region | transcription start site region 140290 | |
Tssr140291 | 16 | 5 | - | TSS region | transcription start site region 140291 | |
Tssr137385 | 16 | 15 | + | TSS region | transcription start site region 137385 | |
Ufd1 | 16 | 23442 | + | protein coding gene | ubiquitin recognition factor in ER-associated degradation 1 | |
Tssr140292 | 16 | 22 | - | TSS region | transcription start site region 140292 | |
Tssr137386 | 16 | 50 | + | TSS region | transcription start site region 137386 | |
D630030B22Rik | 16 | 2166 | unclassified gene | RIKEN cDNA D630030B22 gene | ||
9430099O15Rik | 16 | 2018 | unclassified gene | RIKEN cDNA 9430099O15 gene | ||
Tssr137387 | 16 | 7 | + | TSS region | transcription start site region 137387 | |
Cpgi8062 | 16 | 565 | CpG island | CpG island 8062 | ||
Tssr137388 | 16 | 10 | + | TSS region | transcription start site region 137388 | |
2510002D24Rik | 16 | 3533 | + | protein coding gene | RIKEN cDNA 2510002D24 gene | |
Gm28539 | 16 | 119663 | + | protein coding gene | predicted gene 28539 | |
Mrpl40 | 16 | 4619 | - | protein coding gene | mitochondrial ribosomal protein L40 | |
Cpgi8063 | 16 | 1666 | CpG island | CpG island 8063 | ||
Tssr140293 | 16 | 48 | - | TSS region | transcription start site region 140293 | |
Tssr140294 | 16 | 11 | - | TSS region | transcription start site region 140294 | |
Tssr140295 | 16 | 34 | - | TSS region | transcription start site region 140295 | |
Tssr140296 | 16 | 13 | - | TSS region | transcription start site region 140296 | |
Tssr137389 | 16 | 30 | + | TSS region | transcription start site region 137389 | |
Hira | 16 | 93272 | + | protein coding gene | histone cell cycle regulator | |
Tssr137390 | 16 | 28 | + | TSS region | transcription start site region 137390 | |
Tssr137391 | 16 | 28 | + | TSS region | transcription start site region 137391 | |
Tssr137392 | 16 | 2 | + | TSS region | transcription start site region 137392 | |
Gm15799 | 16 | 288 | + | pseudogene | predicted gene 15799 | |
Gm15798 | 16 | 407 | - | pseudogene | predicted gene 15798 | |
Cpgi8064 | 16 | 196 | CpG island | CpG island 8064 | ||
Gm18747 | 16 | 644 | - | pseudogene | predicted gene, 18747 | |
Igl | 16 | 233986 | - | complex/cluster/region | immunoglobulin lambda chain complex | |
Gm10088 | 16 | 422 | + | pseudogene | predicted gene 10088 | |
Tssr137393 | 16 | 29 | + | TSS region | transcription start site region 137393 | |
Tssr137394 | 16 | 37 | + | TSS region | transcription start site region 137394 | |
Iglc1 | 16 | 319 | - | gene segment | immunoglobulin lambda constant 1 | |
Iglj1 | 16 | 37 | - | gene segment | immunoglobulin lambda joining 1 | |
Tssr140297 | 16 | 11 | - | TSS region | transcription start site region 140297 | |
Tssr140298 | 16 | 19 | - | TSS region | transcription start site region 140298 | |
Tssr137395 | 16 | 37 | + | TSS region | transcription start site region 137395 | |
Tssr140299 | 16 | 39 | - | TSS region | transcription start site region 140299 | |
Tssr140300 | 16 | 39 | - | TSS region | transcription start site region 140300 | |
Tssr137396 | 16 | 27 | + | TSS region | transcription start site region 137396 | |
Tssr140301 | 16 | 9 | - | TSS region | transcription start site region 140301 | |
Iglc3 | 16 | 316 | - | gene segment | immunoglobulin lambda constant 3 | |
Iglj3p | 16 | 37 | - | pseudogenic gene segment | immunoglobulin lambda joining 3 pseudogene | |
Iglj3 | 16 | 37 | - | gene segment | immunoglobulin lambda joining 3 | |
Tssr140302 | 16 | 35 | - | TSS region | transcription start site region 140302 | |
Tssr140303 | 16 | 5 | - | TSS region | transcription start site region 140303 | |
Tssr140304 | 16 | 50 | - | TSS region | transcription start site region 140304 | |
Tssr140305 | 16 | 12 | - | TSS region | transcription start site region 140305 |