Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:17830355-17901728

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr137339 16 17832681 to 17832690 9 + TSS region transcription start site region 137339
Cpgi8029 16 17833066 to 17834576 1510 CpG island CpG island 8029
B830017H08Rik 16 17833121 to 17835008 1887 + lincRNA gene RIKEN cDNA B830017H08 gene
D16Wis1 16 17833221 to 17833468 247 DNA segment DNA segment, Chr 16, Wisconsin 1
Tssr4806 16 17833772 to 17833774 2 - TSS region transcription start site region 4806
Car15 16 17835276 to 17838186 2910 - protein coding gene carbonic anhydrase 15
Gm20518 16 17835277 to 17891671 56394 - protein coding gene predicted gene 20518
Tssr140212 16 17838126 to 17838149 23 - TSS region transcription start site region 140212
Tssr140213 16 17838173 to 17838218 45 - TSS region transcription start site region 140213
Dgcr2 16 17840355 to 17891728 51373 - protein coding gene DiGeorge syndrome critical region gene 2
Del(16Dgcr2-Hira)1Rak 16 17840355 to 18970309 1129954 complex/cluster/region deletion, Chr 16, Raju Kucherlapati 1
Del(16Dgcr2-Hira)3Aam 16 17840355 to 18970309 1129954 complex/cluster/region deletion, Chr 16, Alea A Mills 3
Dp(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 chromosomal duplication duplication, Chr 16, Arthur I Skoultchi 1
Del(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 complex/cluster/region deletion, Chr 16, Arthur I Skoultchi 1
Tssr140214 16 17872623 to 17872665 42 - TSS region transcription start site region 140214
Cpgi8030 16 17891001 to 17892046 1045 CpG island CpG island 8030
Tssr140215 16 17891638 to 17891700 62 - TSS region transcription start site region 140215
Tssr137340 16 17891926 to 17891935 9 + TSS region transcription start site region 137340
Tssr140216 16 17893455 to 17893480 25 - TSS region transcription start site region 140216
Tssr137341 16 17893580 to 17893609 29 + TSS region transcription start site region 137341
Tssr140217 16 17894086 to 17894106 20 - TSS region transcription start site region 140217
Tssr140218 16 17894108 to 17894115 7 - TSS region transcription start site region 140218
Tssr137342 16 17894197 to 17894232 35 + TSS region transcription start site region 137342
Tssk1 16 17894203 to 17895653 1450 + protein coding gene testis-specific serine kinase 1
Tssr137343 16 17894244 to 17894257 13 + TSS region transcription start site region 137343
Tssr137344 16 17898617 to 17898647 30 + TSS region transcription start site region 137344
Tssk2 16 17898637 to 17900024 1387 + protein coding gene testis-specific serine kinase 2
Tssr137345 16 17898648 to 17898673 25 + TSS region transcription start site region 137345
Ess2 16 17900709 to 17911348 10639 - protein coding gene ess-2 splicing factor