Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:17122377-17142388

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
2610318N02Rik	16	17113398 to 17125167	11769	-	protein coding gene	RIKEN cDNA 2610318N02 gene
Mir130b	16	17124061 to 17124142	81	-	miRNA gene	microRNA 130b
Mirc25	16	17124061 to 17124496	435		complex/cluster/region	microRNA cluster 25, including Mir130b through Mir301b
Mir301b	16	17124400 to 17124496	96	-	miRNA gene	microRNA 301b
Cpgi8006	16	17125027 to 17125270	243		CpG island	CpG island 8006
Tssr140164	16	17125130 to 17125146	16	-	TSS region	transcription start site region 140164
Sdf2l1	16	17130138 to 17132383	2245	-	protein coding gene	stromal cell-derived factor 2-like 1
Tssr140165	16	17130276 to 17130280	4	-	TSS region	transcription start site region 140165
Cpgi8007	16	17131472 to 17132687	1215		CpG island	CpG island 8007
Tssr140166	16	17132302 to 17132313	11	-	TSS region	transcription start site region 140166
Tssr140167	16	17132325 to 17132367	42	-	TSS region	transcription start site region 140167
Tssr140168	16	17132377 to 17132388	11	-	TSS region	transcription start site region 140168
Tssr137272	16	17137294 to 17137327	33	+	TSS region	transcription start site region 137272
Gm6440	16	17137328 to 17137681	353	+	pseudogene	predicted gene 6440
Ccdc116	16	17139064 to 17147229	8165	-	protein coding gene	coiled-coil domain containing 116