Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:17091191-17131196

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppil2	16	17086555 to 17111257	24702	-	protein coding gene	peptidylprolyl isomerase (cyclophilin)-like 2
Gm49584	16	17092815 to 17096350	3535	+	antisense lncRNA gene	predicted gene, 49584
Tssr140158	16	17096985 to 17097002	17	-	TSS region	transcription start site region 140158
Cpgi8004	16	17110831 to 17111448	617		CpG island	CpG island 8004
Tssr140159	16	17111191 to 17111196	5	-	TSS region	transcription start site region 140159
Tssr140160	16	17111204 to 17111255	51	-	TSS region	transcription start site region 140160
2610318N02Rik	16	17113398 to 17125167	11769	-	protein coding gene	RIKEN cDNA 2610318N02 gene
Cpgi8005	16	17121072 to 17121582	510		CpG island	CpG island 8005
Tssr140161	16	17121708 to 17121711	3	-	TSS region	transcription start site region 140161
Tssr140162	16	17121734 to 17121767	33	-	TSS region	transcription start site region 140162
Tssr140163	16	17121771 to 17121795	24	-	TSS region	transcription start site region 140163
Mir130b	16	17124061 to 17124142	81	-	miRNA gene	microRNA 130b
Mirc25	16	17124061 to 17124496	435		complex/cluster/region	microRNA cluster 25, including Mir130b through Mir301b
Mir301b	16	17124400 to 17124496	96	-	miRNA gene	microRNA 301b
Cpgi8006	16	17125027 to 17125270	243		CpG island	CpG island 8006
Tssr140164	16	17125130 to 17125146	16	-	TSS region	transcription start site region 140164
Sdf2l1	16	17130138 to 17132383	2245	-	protein coding gene	stromal cell-derived factor 2-like 1
Tssr140165	16	17130276 to 17130280	4	-	TSS region	transcription start site region 140165