Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:16979539-17109559

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8002 16 16983043 to 16984086 1043 CpG island CpG island 8002
Mapk1 16 16983382 to 17047453 64071 + protein coding gene mitogen-activated protein kinase 1
Tssr137252 16 16983395 to 16983416 21 + TSS region transcription start site region 137252
Tssr137253 16 16983417 to 16983428 11 + TSS region transcription start site region 137253
Tssr137254 16 16983435 to 16983442 7 + TSS region transcription start site region 137254
Tssr137255 16 16983454 to 16983461 7 + TSS region transcription start site region 137255
Gm22558 16 17006107 to 17006201 94 - snRNA gene predicted gene, 22558
Tssr137256 16 17018384 to 17018399 15 + TSS region transcription start site region 137256
Tssr137257 16 17026353 to 17026371 18 + TSS region transcription start site region 137257
Tssr137258 16 17026410 to 17026434 24 + TSS region transcription start site region 137258
Tssr137259 16 17035583 to 17035596 13 + TSS region transcription start site region 137259
Tssr137260 16 17043697 to 17043736 39 + TSS region transcription start site region 137260
Tssr137261 16 17043961 to 17043982 21 + TSS region transcription start site region 137261
Tssr137262 16 17044203 to 17044216 13 + TSS region transcription start site region 137262
Tssr137263 16 17044539 to 17044559 20 + TSS region transcription start site region 137263
Tssr137264 16 17045105 to 17045143 38 + TSS region transcription start site region 137264
1700056N10Rik 16 17047520 to 17049111 1591 + lincRNA gene RIKEN cDNA 1700056N10 gene
Cpgi8003 16 17069679 to 17070495 816 CpG island CpG island 8003
Tssr137265 16 17070127 to 17070215 88 + TSS region transcription start site region 137265
Ypel1 16 17070139 to 17086736 16597 + protein coding gene yippee like 1
Tssr137266 16 17070220 to 17070239 19 + TSS region transcription start site region 137266
Tssr137267 16 17070247 to 17070254 7 + TSS region transcription start site region 137267
Tssr137268 16 17070264 to 17070275 11 + TSS region transcription start site region 137268
Tssr137269 16 17070281 to 17070320 39 + TSS region transcription start site region 137269
Tssr137270 16 17070323 to 17070336 13 + TSS region transcription start site region 137270
Tssr137271 16 17070342 to 17070345 3 + TSS region transcription start site region 137271
Gm9974 16 17081999 to 17082691 692 - pseudogene predicted gene 9974
Ppil2 16 17086555 to 17111257 24702 - protein coding gene peptidylprolyl isomerase (cyclophilin)-like 2
Gm49584 16 17092815 to 17096350 3535 + antisense lncRNA gene predicted gene, 49584
Tssr140158 16 17096985 to 17097002 17 - TSS region transcription start site region 140158