Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:16583090-16853103

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgd4 16 16416910 to 16600541 183631 - protein coding gene FYVE, RhoGEF and PH domain containing 4
Cpgi7998 16 16599504 to 16600405 901 CpG island CpG island 7998
Tssr140145 16 16600011 to 16600081 70 - TSS region transcription start site region 140145
Tssr140146 16 16600097 to 16600110 13 - TSS region transcription start site region 140146
Tssr140147 16 16600533 to 16600576 43 - TSS region transcription start site region 140147
Gm44932 16 16672390 to 16672510 120 - pseudogene predicted gene 44932
Olfr19 16 16673050 to 16673979 929 - protein coding gene olfactory receptor 19
4933404G15Rik 16 16707687 to 16718121 10434 - lincRNA gene RIKEN cDNA 4933404G15 gene
Tssr140148 16 16718090 to 16718103 13 - TSS region transcription start site region 140148
Tssr140149 16 16718111 to 16718120 9 - TSS region transcription start site region 140149
Tssr140150 16 16718126 to 16718135 9 - TSS region transcription start site region 140150
Gm46570 16 16718213 to 16730527 12314 + lncRNA gene predicted gene, 46570
Gm34340 16 16728744 to 16742837 14093 - lncRNA gene predicted gene, 34340
Spag6l 16 16753016 to 16829456 76440 - protein coding gene sperm associated antigen 6-like
Rpl31-ps12 16 16819749 to 16820123 374 - pseudogene ribosomal protein L31, pseudogene 1 2
Cpgi7999 16 16828920 to 16829496 576 CpG island CpG island 7999
Tssr140151 16 16829243 to 16829253 10 - TSS region transcription start site region 140151
Tssr140152 16 16829258 to 16829261 3 - TSS region transcription start site region 140152
Tssr140153 16 16829276 to 16829349 73 - TSS region transcription start site region 140153
Gm49644 16 16848851 to 16849698 847 - pseudogene predicted gene, 49644
Tssr4803 16 16852297 to 16852312 15 + TSS region transcription start site region 4803
Gm5768 16 16852315 to 16853857 1542 + pseudogene predicted gene 5768