MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:16263424-16363444

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pkp2	16	16213345 to 16272712	59367	+	protein coding gene	plakophilin 2
Tssr137239	16	16269681 to 16269689	8	+	TSS region	transcription start site region 137239
Gm5481	16	16275603 to 16275947	344	+	protein coding gene	predicted gene 5481
Tssr140117	16	16292034 to 16292038	4	-	TSS region	transcription start site region 140117
Cpgi7996	16	16302545 to 16303799	1254		CpG island	CpG island 7996
Tssr137240	16	16302955 to 16302987	32	+	TSS region	transcription start site region 137240
Yars2	16	16302965 to 16309640	6675	+	protein coding gene	tyrosyl-tRNA synthetase 2 (mitochondrial)
Tssr137241	16	16303018 to 16303029	11	+	TSS region	transcription start site region 137241
Tssr137242	16	16303536 to 16303564	28	+	TSS region	transcription start site region 137242
Tssr137243	16	16306468 to 16306494	26	+	TSS region	transcription start site region 137243
Dnm1l	16	16312230 to 16358959	46729	-	protein coding gene	dynamin 1-like
Tssr140118	16	16313424 to 16313444	20	-	TSS region	transcription start site region 140118
Gm49521	16	16349203 to 16359011	9808	+	antisense lncRNA gene	predicted gene, 49521
Cpgi7997	16	16358466 to 16359168	702		CpG island	CpG island 7997
Tssr140119	16	16358512 to 16358523	11	-	TSS region	transcription start site region 140119
Tssr140120	16	16358528 to 16358573	45	-	TSS region	transcription start site region 140120
Tssr140121	16	16358903 to 16359009	106	-	TSS region	transcription start site region 140121
Tssr140122	16	16359016 to 16359040	24	-	TSS region	transcription start site region 140122