Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:16254212-16505208

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkp2 16 16213345 to 16272712 59367 + protein coding gene plakophilin 2
Tssr137239 16 16269681 to 16269689 8 + TSS region transcription start site region 137239
Gm5481 16 16275603 to 16275947 344 + protein coding gene predicted gene 5481
Tssr140117 16 16292034 to 16292038 4 - TSS region transcription start site region 140117
Cpgi7996 16 16302545 to 16303799 1254 CpG island CpG island 7996
Tssr137240 16 16302955 to 16302987 32 + TSS region transcription start site region 137240
Yars2 16 16302965 to 16309640 6675 + protein coding gene tyrosyl-tRNA synthetase 2 (mitochondrial)
Tssr137241 16 16303018 to 16303029 11 + TSS region transcription start site region 137241
Tssr137242 16 16303536 to 16303564 28 + TSS region transcription start site region 137242
Tssr137243 16 16306468 to 16306494 26 + TSS region transcription start site region 137243
Dnm1l 16 16312230 to 16358959 46729 - protein coding gene dynamin 1-like
Tssr140118 16 16313424 to 16313444 20 - TSS region transcription start site region 140118
Gm49521 16 16349203 to 16359011 9808 + antisense lncRNA gene predicted gene, 49521
Cpgi7997 16 16358466 to 16359168 702 CpG island CpG island 7997
Tssr140119 16 16358512 to 16358523 11 - TSS region transcription start site region 140119
Tssr140120 16 16358528 to 16358573 45 - TSS region transcription start site region 140120
Tssr140121 16 16358903 to 16359009 106 - TSS region transcription start site region 140121
Tssr140122 16 16359016 to 16359040 24 - TSS region transcription start site region 140122
Gm7765 16 16365184 to 16366157 973 - pseudogene predicted gene 7765
Tssr140123 16 16367247 to 16367271 24 - TSS region transcription start site region 140123
Gm18869 16 16379212 to 16380208 996 + pseudogene predicted gene, 18869
Tssr4802 16 16409584 to 16409587 3 + TSS region transcription start site region 4802
Fgd4 16 16416910 to 16600541 183631 - protein coding gene FYVE, RhoGEF and PH domain containing 4
Tssr140124 16 16439485 to 16439517 32 - TSS region transcription start site region 140124
Tssr140125 16 16455074 to 16455078 4 - TSS region transcription start site region 140125
Tssr140126 16 16456071 to 16456075 4 - TSS region transcription start site region 140126
Tssr140127 16 16473976 to 16473987 11 - TSS region transcription start site region 140127
Tssr140128 16 16490536 to 16490548 12 - TSS region transcription start site region 140128
Tssr140129 16 16496139 to 16496153 14 - TSS region transcription start site region 140129