Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:16006349-16287104

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spidr 16 15889224 to 16146851 257627 - protein coding gene scaffolding protein involved in DNA repair
n-R5s31 16 16010900 to 16011009 109 - rRNA gene nuclear encoded rRNA 5S 31
Gm10121 16 16048815 to 16049759 944 + pseudogene predicted gene 10121
Tssr137232 16 16072742 to 16072751 9 + TSS region transcription start site region 137232
Tssr137233 16 16072755 to 16072773 18 + TSS region transcription start site region 137233
Tssr137234 16 16072781 to 16072792 11 + TSS region transcription start site region 137234
Tssr137235 16 16072793 to 16072797 4 + TSS region transcription start site region 137235
Tssr140114 16 16073392 to 16073399 7 - TSS region transcription start site region 140114
Tssr140115 16 16073404 to 16073450 46 - TSS region transcription start site region 140115
Gm18334 16 16099600 to 16100109 509 + pseudogene predicted gene, 18334
Cpgi7993 16 16146349 to 16147104 755 CpG island CpG island 7993
Tssr140116 16 16146771 to 16146836 65 - TSS region transcription start site region 140116
Rpl29-ps4 16 16158214 to 16158865 651 + pseudogene ribosomal protein L29, pseudogene 4
D16Ertd727e 16 16196302 to 16198747 2445 - pseudogene DNA segment, Chr 16, ERATO Doi 727, expressed
Cpgi7994 16 16213033 to 16213830 797 CpG island CpG island 7994
Tssr137236 16 16213122 to 16213138 16 + TSS region transcription start site region 137236
Tssr137237 16 16213325 to 16213364 39 + TSS region transcription start site region 137237
Pkp2 16 16213345 to 16272712 59367 + protein coding gene plakophilin 2
Cpgi7995 16 16225850 to 16226320 470 CpG island CpG island 7995
Tssr137238 16 16232428 to 16232432 4 + TSS region transcription start site region 137238
Tssr137239 16 16269681 to 16269689 8 + TSS region transcription start site region 137239
Gm5481 16 16275603 to 16275947 344 + protein coding gene predicted gene 5481