Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:15889600-16310109

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spidr 16 15889224 to 16146851 257627 - protein coding gene scaffolding protein involved in DNA repair
Tssr137230 16 15892236 to 15892239 3 + TSS region transcription start site region 137230
Tssr140108 16 15895707 to 15895721 14 - TSS region transcription start site region 140108
Tssr140109 16 15895724 to 15895732 8 - TSS region transcription start site region 140109
Tssr140110 16 15895765 to 15895795 30 - TSS region transcription start site region 140110
Tssr140111 16 15895797 to 15895804 7 - TSS region transcription start site region 140111
D16Mit34 16 15913052 to 15913189 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 34
nmf219 16 15913052 to 32312179 16399127 heritable phenotypic marker neuroscience mutagenesis facility, 219
Rapop1 16 15913189 to 3962915 -11950274 QTL radiation-induced apoptosis 1
Tssr140112 16 15957740 to 15957743 3 - TSS region transcription start site region 140112
Tssr140113 16 15966655 to 15966670 15 - TSS region transcription start site region 140113
Tssr137231 16 15984477 to 15984512 35 + TSS region transcription start site region 137231
n-R5s31 16 16010900 to 16011009 109 - rRNA gene nuclear encoded rRNA 5S 31
Gm10121 16 16048815 to 16049759 944 + pseudogene predicted gene 10121
Tssr137232 16 16072742 to 16072751 9 + TSS region transcription start site region 137232
Tssr137233 16 16072755 to 16072773 18 + TSS region transcription start site region 137233
Tssr137234 16 16072781 to 16072792 11 + TSS region transcription start site region 137234
Tssr137235 16 16072793 to 16072797 4 + TSS region transcription start site region 137235
Tssr140114 16 16073392 to 16073399 7 - TSS region transcription start site region 140114
Tssr140115 16 16073404 to 16073450 46 - TSS region transcription start site region 140115
Gm18334 16 16099600 to 16100109 509 + pseudogene predicted gene, 18334
Cpgi7993 16 16146349 to 16147104 755 CpG island CpG island 7993
Tssr140116 16 16146771 to 16146836 65 - TSS region transcription start site region 140116
Rpl29-ps4 16 16158214 to 16158865 651 + pseudogene ribosomal protein L29, pseudogene 4
D16Ertd727e 16 16196302 to 16198747 2445 - pseudogene DNA segment, Chr 16, ERATO Doi 727, expressed
Cpgi7994 16 16213033 to 16213830 797 CpG island CpG island 7994
Tssr137236 16 16213122 to 16213138 16 + TSS region transcription start site region 137236
Tssr137237 16 16213325 to 16213364 39 + TSS region transcription start site region 137237
Pkp2 16 16213345 to 16272712 59367 + protein coding gene plakophilin 2
Cpgi7995 16 16225850 to 16226320 470 CpG island CpG island 7995
Tssr137238 16 16232428 to 16232432 4 + TSS region transcription start site region 137238
Tssr137239 16 16269681 to 16269689 8 + TSS region transcription start site region 137239
Gm5481 16 16275603 to 16275947 344 + protein coding gene predicted gene 5481
Tssr140117 16 16292034 to 16292038 4 - TSS region transcription start site region 140117
Cpgi7996 16 16302545 to 16303799 1254 CpG island CpG island 7996
Tssr137240 16 16302955 to 16302987 32 + TSS region transcription start site region 137240
Yars2 16 16302965 to 16309640 6675 + protein coding gene tyrosyl-tRNA synthetase 2 (mitochondrial)
Tssr137241 16 16303018 to 16303029 11 + TSS region transcription start site region 137241
Tssr137242 16 16303536 to 16303564 28 + TSS region transcription start site region 137242
Tssr137243 16 16306468 to 16306494 26 + TSS region transcription start site region 137243