Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:13982467-15859676

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148 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ifitm7 16 13981699 to 13986888 5189 - protein coding gene interferon induced transmembrane protein 7
Tssr137173 16 13986596 to 13986665 69 + TSS region transcription start site region 137173
Bmerb1 16 13986604 to 14101500 114896 + protein coding gene bMERB domain containing 1
Cpgi7981 16 13986802 to 13987200 398 CpG island CpG island 7981
Tssr140065 16 13986835 to 13986854 19 - TSS region transcription start site region 140065
Tssr140066 16 13986874 to 13986906 32 - TSS region transcription start site region 140066
Tssr140067 16 13986913 to 13986933 20 - TSS region transcription start site region 140067
Tssr140068 16 13986944 to 13986950 6 - TSS region transcription start site region 140068
Tssr140069 16 13987221 to 13987244 23 - TSS region transcription start site region 140069
Ppsl 16 13996540 to 13996708 168 QTL plasma P-selectin levels
D16Mit165 16 13996540 to 13996708 168 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 165
Gm15806 16 14010804 to 14011701 897 - pseudogene predicted gene 15806
2900037P16Rik 16 14012922 to 14013122 200 unclassified gene RIKEN cDNA 2900037P16 gene
Gm15807 16 14037902 to 14039009 1107 - pseudogene predicted gene 15807
Gm15808 16 14067403 to 14068006 603 + pseudogene predicted gene 15808
Tssr137174 16 14100035 to 14100046 11 + TSS region transcription start site region 137174
Marf1 16 14109166 to 14159274 50108 - protein coding gene meiosis regulator and mRNA stability 1
Tssr140070 16 14110068 to 14110069 1 - TSS region transcription start site region 140070
Gm27671 16 14128566 to 14128631 65 - miRNA gene predicted gene, 27671
Cpgi7982 16 14158881 to 14159693 812 CpG island CpG island 7982
Tssr140071 16 14159173 to 14159196 23 - TSS region transcription start site region 140071
Tssr140072 16 14159232 to 14159286 54 - TSS region transcription start site region 140072
Mir484 16 14159626 to 14159692 66 + miRNA gene microRNA 484
Tssr137175 16 14159632 to 14159643 11 + TSS region transcription start site region 137175
Cpgi7983 16 14162953 to 14163756 803 CpG island CpG island 7983
Nde1 16 14163275 to 14192928 29653 + protein coding gene nudE neurodevelopment protein 1
Tssr137176 16 14163287 to 14163307 20 + TSS region transcription start site region 137176
Tssr137177 16 14163316 to 14163352 36 + TSS region transcription start site region 137177
Tssr137178 16 14172264 to 14172267 3 + TSS region transcription start site region 137178
Myh11 16 14194535 to 14291372 96837 - protein coding gene myosin, heavy polypeptide 11, smooth muscle
Tssr140073 16 14195132 to 14195151 19 - TSS region transcription start site region 140073
Tssr140074 16 14202101 to 14202110 9 - TSS region transcription start site region 140074
Tssr140075 16 14203195 to 14203209 14 - TSS region transcription start site region 140075
Tssr140076 16 14204701 to 14204712 11 - TSS region transcription start site region 140076
Tssr140077 16 14205134 to 14205140 6 - TSS region transcription start site region 140077
Tssr137179 16 14205500 to 14205529 29 + TSS region transcription start site region 137179
Tssr137180 16 14207646 to 14207653 7 + TSS region transcription start site region 137180
Tssr137181 16 14207686 to 14207728 42 + TSS region transcription start site region 137181
Tssr140078 16 14208286 to 14208305 19 - TSS region transcription start site region 140078
Tssr137182 16 14209583 to 14209619 36 + TSS region transcription start site region 137182
Tssr137183 16 14209650 to 14209682 32 + TSS region transcription start site region 137183
Tssr4797 16 14211321 to 14211342 21 + TSS region transcription start site region 4797
Tssr140079 16 14212549 to 14212559 10 - TSS region transcription start site region 140079
Tssr137184 16 14215745 to 14215770 25 + TSS region transcription start site region 137184
Tssr140080 16 14215835 to 14215851 16 - TSS region transcription start site region 140080
Tssr137185 16 14215860 to 14215880 20 + TSS region transcription start site region 137185
Tssr140081 16 14215883 to 14215894 11 - TSS region transcription start site region 140081
Tssr140082 16 14217990 to 14218011 21 - TSS region transcription start site region 140082
Tssr140083 16 14218898 to 14218912 14 - TSS region transcription start site region 140083
Tssr137186 16 14218906 to 14218927 21 + TSS region transcription start site region 137186
Tssr140084 16 14218936 to 14218960 24 - TSS region transcription start site region 140084
Tssr140085 16 14226509 to 14226532 23 - TSS region transcription start site region 140085
Tssr140086 16 14243913 to 14243924 11 - TSS region transcription start site region 140086
Tssr140087 16 14248983 to 14248992 9 - TSS region transcription start site region 140087
Tssr140088 16 14270075 to 14270080 5 - TSS region transcription start site region 140088
Tssr140089 16 14275485 to 14275488 3 - TSS region transcription start site region 140089
Tssr140090 16 14291355 to 14291371 16 - TSS region transcription start site region 140090
Cpgi7984 16 14292335 to 14292608 273 CpG island CpG island 7984
Fopnl 16 14299244 to 14317405 18161 - protein coding gene Fgfr1op N-terminal like
Gm15868 16 14311841 to 14314014 2173 + antisense lncRNA gene predicted gene 15868
Cpgi7985 16 14316878 to 14317672 794 CpG island CpG island 7985
Tssr137187 16 14317281 to 14317290 9 + TSS region transcription start site region 137187
Tssr140091 16 14317319 to 14317370 51 - TSS region transcription start site region 140091
Tssr137188 16 14317441 to 14317473 32 + TSS region transcription start site region 137188
Tssr137189 16 14317485 to 14317502 17 + TSS region transcription start site region 137189
Tssr137190 16 14317516 to 14317533 17 + TSS region transcription start site region 137190
Tssr137191 16 14352842 to 14352889 47 + TSS region transcription start site region 137191
Tssr4798 16 14357622 to 14357642 20 + TSS region transcription start site region 4798
Gm49517 16 14358432 to 14358897 465 + pseudogene predicted gene, 49517
Cpgi7986 16 14361185 to 14362004 819 CpG island CpG island 7986
Tssr137192 16 14361446 to 14361451 5 + TSS region transcription start site region 137192
Abcc1 16 14361512 to 14474879 113367 + protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Tssr137193 16 14361552 to 14361601 49 + TSS region transcription start site region 137193
Tssr137194 16 14365724 to 14365743 19 + TSS region transcription start site region 137194
Tssr137195 16 14370977 to 14370992 15 + TSS region transcription start site region 137195
Tssr137196 16 14373329 to 14373335 6 + TSS region transcription start site region 137196
Tssr137197 16 14373624 to 14373650 26 + TSS region transcription start site region 137197
Gm23116 16 14382807 to 14382873 66 + snRNA gene predicted gene, 23116
Tssr137198 16 14389876 to 14389919 43 + TSS region transcription start site region 137198
Tssr137199 16 14398279 to 14398295 16 + TSS region transcription start site region 137199
Tssr137200 16 14403153 to 14403156 3 + TSS region transcription start site region 137200
D16Ertd780e 16 14434352 to 14434551 199 DNA segment DNA segment, Chr 16, ERATO Doi 780, expressed
Tssr137201 16 14441293 to 14441313 20 + TSS region transcription start site region 137201
Tssr137202 16 14451730 to 14451732 2 + TSS region transcription start site region 137202
Tssr137203 16 14458614 to 14458624 10 + TSS region transcription start site region 137203
Tssr137204 16 14472036 to 14472051 15 + TSS region transcription start site region 137204
Tssr137205 16 14473618 to 14473647 29 + TSS region transcription start site region 137205
Tssr137206 16 14474296 to 14474336 40 + TSS region transcription start site region 137206
Gm49528 16 14479898 to 14483746 3848 - pseudogene predicted gene, 49528
Tssr137207 16 14501872 to 14501883 11 + TSS region transcription start site region 137207
Gm1758 16 14502100 to 14509221 7121 + protein coding gene predicted gene 1758
A630010A05Rik 16 14562317 to 14621284 58967 + protein coding gene RIKEN cDNA A630010A05 gene
Cpgi7987 16 14705435 to 14706414 979 CpG island CpG island 7987
Tssr137208 16 14705575 to 14705590 15 + TSS region transcription start site region 137208
Tssr137209 16 14705595 to 14705618 23 + TSS region transcription start site region 137209
Tssr4799 16 14705619 to 14705635 16 + TSS region transcription start site region 4799
Tssr137210 16 14705653 to 14705668 15 + TSS region transcription start site region 137210
Tssr137211 16 14705832 to 14705858 26 + TSS region transcription start site region 137211
Snai2 16 14705859 to 14709385 3526 + protein coding gene snail family zinc finger 2
Tssr137212 16 14705868 to 14705885 17 + TSS region transcription start site region 137212
Tssr137213 16 14706881 to 14706903 22 + TSS region transcription start site region 137213
Tssr137214 16 14708115 to 14708123 8 + TSS region transcription start site region 137214
Tssr137215 16 14708137 to 14708161 24 + TSS region transcription start site region 137215
Tssr137216 16 14708171 to 14708181 10 + TSS region transcription start site region 137216
Tssr137217 16 14708210 to 14708227 17 + TSS region transcription start site region 137217
Tssr137218 16 14708265 to 14708308 43 + TSS region transcription start site region 137218
Tssr137219 16 14708309 to 14708334 25 + TSS region transcription start site region 137219
Tssr4800 16 14708336 to 14708337 1 + TSS region transcription start site region 4800
Tssr137220 16 14708360 to 14708411 51 + TSS region transcription start site region 137220
Gm49530 16 14790417 to 14791011 594 - pseudogene predicted gene, 49530
Gm25547 16 14807163 to 14807269 106 - snRNA gene predicted gene, 25547
Gm33696 16 14892467 to 14949676 57209 - antisense lncRNA gene predicted gene, 33696
Efcab1 16 14906260 to 14965910 59650 + protein coding gene EF-hand calcium binding domain 1
Tssr137221 16 14906622 to 14906680 58 + TSS region transcription start site region 137221
Gm46561 16 14957623 to 14958505 882 - pseudogene predicted gene, 46561
Gm49536 16 15000322 to 15000489 167 + pseudogene predicted gene, 49536
Cpgi7988 16 15084477 to 15085325 848 CpG island CpG island 7988
F830005K03Rik 16 15092428 to 15095785 3357 - unclassified gene RIKEN cDNA F830005K03 gene
Gm41423 16 15101376 to 15114218 12842 - lncRNA gene predicted gene, 41423
Tssr140092 16 15114100 to 15114132 32 - TSS region transcription start site region 140092
Gm7731 16 15216859 to 15217328 469 - pseudogene predicted gene 7731
Gm5404 16 15218844 to 15221508 2664 + pseudogene predicted gene 5404
Tssr4801 16 15301395 to 15301405 10 - TSS region transcription start site region 4801
Gm21897 16 15317458 to 15318957 1499 + protein coding gene predicted gene, 21897
Tssr137222 16 15345534 to 15345535 1 + TSS region transcription start site region 137222
D16Mit56 16 15365376 to 15365459 83 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 56
Gm6031 16 15426151 to 15427204 1053 + pseudogene predicted gene 6031
Gm7085 16 15452004 to 15452762 758 + pseudogene predicted gene 7085
Gm41424 16 15490234 to 15529006 38772 - lncRNA gene predicted gene, 41424
Ube2v2 16 15550986 to 15594518 43532 - protein coding gene ubiquitin-conjugating enzyme E2 variant 2
Tssr140093 16 15564710 to 15564716 6 - TSS region transcription start site region 140093
Gm49538 16 15587365 to 15588059 694 + pseudogene predicted gene, 49538
Cpgi7989 16 15594020 to 15594665 645 CpG island CpG island 7989
Tssr140094 16 15594473 to 15594503 30 - TSS region transcription start site region 140094
Tssr140095 16 15594509 to 15594531 22 - TSS region transcription start site region 140095
Tssr137223 16 15604480 to 15604488 8 + TSS region transcription start site region 137223
Gm7748 16 15609107 to 15609515 408 + pseudogene predicted gene 7748
Mcm4 16 15623897 to 15637400 13503 - protein coding gene minichromosome maintenance complex component 4
Tssr140096 16 15626273 to 15626277 4 - TSS region transcription start site region 140096
Cpgi7990 16 15636680 to 15638278 1598 CpG island CpG island 7990
Tssr140097 16 15636729 to 15636748 19 - TSS region transcription start site region 140097
Tssr140098 16 15637277 to 15637385 108 - TSS region transcription start site region 140098
Tssr137224 16 15637844 to 15637884 40 + TSS region transcription start site region 137224
Prkdc 16 15637866 to 15842235 204369 + protein coding gene protein kinase, DNA activated, catalytic polypeptide
Tssr137225 16 15705225 to 15705249 24 + TSS region transcription start site region 137225
Tssr140099 16 15736677 to 15736679 2 - TSS region transcription start site region 140099
Gm49511 16 15750923 to 15751192 269 + pseudogene predicted gene, 49511
Mzt2 16 15848441 to 15863364 14923 - protein coding gene mitotic spindle organizing protein 2