Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:13735708-13859839

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pla2g10os 16 13729836 to 13739471 9635 + antisense lncRNA gene phospholipase A2, group X, opposite strand
Gm49432 16 13737852 to 13739204 1352 - lincRNA gene predicted gene, 49432
Tssr140053 16 13739201 to 13739223 22 - TSS region transcription start site region 140053
Tssr137152 16 13749540 to 13749566 26 + TSS region transcription start site region 137152
Tssr140054 16 13750013 to 13750042 29 - TSS region transcription start site region 140054
Tssr140055 16 13750790 to 13750805 15 - TSS region transcription start site region 140055
Tssr140056 16 13750831 to 13750842 11 - TSS region transcription start site region 140056
Tssr140057 16 13750856 to 13750869 13 - TSS region transcription start site region 140057
Tssr140058 16 13750873 to 13750889 16 - TSS region transcription start site region 140058
Cpgi7975 16 13754407 to 13755376 969 CpG island CpG island 7975
A930007A09Rik 16 13754455 to 13758535 4080 + unclassified non-coding RNA gene RIKEN cDNA A930007A09 gene
Tssr137153 16 13754554 to 13754628 74 + TSS region transcription start site region 137153
Tssr137154 16 13758036 to 13758039 3 + TSS region transcription start site region 137154
Gm6354 16 13778971 to 13780548 1577 - pseudogene predicted gene 6354
Cpgi7976 16 13780397 to 13781084 687 CpG island CpG island 7976
Tssr137155 16 13780505 to 13780523 18 + TSS region transcription start site region 137155
Tssr137156 16 13780600 to 13780623 23 + TSS region transcription start site region 137156
Tssr140059 16 13780635 to 13780657 22 - TSS region transcription start site region 140059
Tssr137157 16 13780699 to 13780755 56 + TSS region transcription start site region 137157
Rrn3 16 13780708 to 13814839 34131 + protein coding gene RRN3 RNA polymerase I transcription factor homolog (yeast)
Tssr137158 16 13780770 to 13780781 11 + TSS region transcription start site region 137158
Tssr137159 16 13813294 to 13813332 38 + TSS region transcription start site region 137159
Tssr137160 16 13813943 to 13813954 11 + TSS region transcription start site region 137160
Cpgi7977 16 13818648 to 13819744 1096 CpG island CpG island 7977
Ntan1 16 13818845 to 13835451 16606 + protein coding gene N-terminal Asn amidase
Tssr137161 16 13818855 to 13818883 28 + TSS region transcription start site region 137161
Gm27734 16 13819232 to 13819320 88 + miRNA gene predicted gene, 27734
Tssr137162 16 13819306 to 13819369 63 + TSS region transcription start site region 137162
Tssr137163 16 13829007 to 13829029 22 + TSS region transcription start site region 137163
Tssr137164 16 13830566 to 13830577 11 + TSS region transcription start site region 137164
Tssr137165 16 13830596 to 13830601 5 + TSS region transcription start site region 137165
Tssr137166 16 13830608 to 13830619 11 + TSS region transcription start site region 137166
Pdxdc1 16 13833148 to 13903131 69983 - protein coding gene pyridoxal-dependent decarboxylase domain containing 1