Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:13482960-13723170

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2310015D24Rik 16 13514131 to 13520419 6288 - lincRNA gene RIKEN cDNA 2310015D24 gene
Tssr140041 16 13520429 to 13520438 9 - TSS region transcription start site region 140041
Gm25276 16 13531428 to 13531551 123 - snoRNA gene predicted gene, 25276
Parn 16 13537960 to 13668170 130210 - protein coding gene poly(A)-specific ribonuclease (deadenylation nuclease)
Tssr140042 16 13541231 to 13541267 36 - TSS region transcription start site region 140042
Gm33329 16 13560896 to 13562723 1827 + pseudogene predicted gene, 33329
Tssr140043 16 13611748 to 13611753 5 - TSS region transcription start site region 140043
Cpgi7973 16 13667701 to 13668306 605 CpG island CpG island 7973
Tssr140044 16 13668122 to 13668181 59 - TSS region transcription start site region 140044
Cpgi7974 16 13671717 to 13672648 931 CpG island CpG island 7974
Bfar 16 13671858 to 13703612 31754 + protein coding gene bifunctional apoptosis regulator
Tssr137140 16 13671858 to 13671918 60 + TSS region transcription start site region 137140
Tssr137141 16 13671922 to 13671937 15 + TSS region transcription start site region 137141
3110001I22Rik 16 13671929 to 13678388 6459 + protein coding gene RIKEN cDNA 3110001I22 gene
Tssr137142 16 13671944 to 13671978 34 + TSS region transcription start site region 137142
Tssr137143 16 13671980 to 13672032 52 + TSS region transcription start site region 137143
Tssr137144 16 13672033 to 13672045 12 + TSS region transcription start site region 137144
Tssr140045 16 13672619 to 13672628 9 - TSS region transcription start site region 140045
Tssr140046 16 13672631 to 13672646 15 - TSS region transcription start site region 140046
Tssr137145 16 13702476 to 13702504 28 + TSS region transcription start site region 137145
Tssr137146 16 13702536 to 13702558 22 + TSS region transcription start site region 137146
Tssr137147 16 13702566 to 13702591 25 + TSS region transcription start site region 137147
Tssr137148 16 13702673 to 13702682 9 + TSS region transcription start site region 137148
Tssr137149 16 13703100 to 13703114 14 + TSS region transcription start site region 137149
Pla2g10 16 13715057 to 13730983 15926 - protein coding gene phospholipase A2, group X