Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:10997866-11157891

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr139991 16 11006070 to 11006109 39 - TSS region transcription start site region 139991
Tssr137066 16 11008464 to 11008493 29 + TSS region transcription start site region 137066
Gm4262 16 11008898 to 11015184 6286 + lincRNA gene predicted gene 4262
Tssr137067 16 11008935 to 11008946 11 + TSS region transcription start site region 137067
Tssr137068 16 11011510 to 11011551 41 + TSS region transcription start site region 137068
Tssr139992 16 11021516 to 11021556 40 - TSS region transcription start site region 139992
Tssr137069 16 11021643 to 11021682 39 + TSS region transcription start site region 137069
Tssr4795 16 11022148 to 11022151 3 - TSS region transcription start site region 4795
Tssr137070 16 11022322 to 11022332 10 + TSS region transcription start site region 137070
Gm10832 16 11031956 to 11036420 4464 + lincRNA gene predicted gene 10832
Tssr137071 16 11032100 to 11032139 39 + TSS region transcription start site region 137071
Gm3919 16 11036674 to 11037331 657 - pseudogene predicted gene 3919
Gm18724 16 11046935 to 11047932 997 + pseudogene predicted gene, 18724
1700096C16Rik 16 11055919 to 11056084 165 unclassified gene RIKEN cDNA 1700096C16 gene
Gm9861 16 11059975 to 11066217 6242 - unclassified gene predicted gene 9861
Tssr137072 16 11060935 to 11060949 14 + TSS region transcription start site region 137072
Cpgi7958 16 11065838 to 11067163 1325 CpG island CpG island 7958
Tssr139993 16 11066077 to 11066109 32 - TSS region transcription start site region 139993
Tssr139994 16 11066141 to 11066165 24 - TSS region transcription start site region 139994
Tssr137073 16 11066292 to 11066381 89 + TSS region transcription start site region 137073
Snn 16 11066298 to 11074985 8687 + protein coding gene stannin
Txndc11 16 11074911 to 11134650 59739 - protein coding gene thioredoxin domain containing 11
Tssr137074 16 11077866 to 11077891 25 + TSS region transcription start site region 137074
Cpgi7959 16 11133993 to 11135111 1118 CpG island CpG island 7959
Tssr139995 16 11134497 to 11134512 15 - TSS region transcription start site region 139995
Tssr139996 16 11134546 to 11134590 44 - TSS region transcription start site region 139996
Tssr139997 16 11134601 to 11134623 22 - TSS region transcription start site region 139997
Tssr139998 16 11134624 to 11134659 35 - TSS region transcription start site region 139998
Zc3h7a 16 11136594 to 11176393 39799 - protein coding gene zinc finger CCCH type containing 7 A
D16Mit164 16 11139692 to 11139842 150 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 164
Dice1a 16 11139842 to 7983236 -3156606 QTL determination of interleukin 4 commitment 1a
Tssr137075 16 11143903 to 11143905 2 + TSS region transcription start site region 137075
Tssr137076 16 11143967 to 11143990 23 + TSS region transcription start site region 137076
Tssr137077 16 11144042 to 11144081 39 + TSS region transcription start site region 137077
Cpgi7960 16 11144061 to 11144431 370 CpG island CpG island 7960
Tssr137078 16 11144095 to 11144118 23 + TSS region transcription start site region 137078
Gm23935 16 11144125 to 11144181 56 + miRNA gene predicted gene, 23935
Tssr139999 16 11150133 to 11150137 4 - TSS region transcription start site region 139999
Tssr140000 16 11151731 to 11151765 34 - TSS region transcription start site region 140000
Tssr140001 16 11155096 to 11155115 19 - TSS region transcription start site region 140001