Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:10377340-10517369

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tekt5 16 10357952 to 10395465 37513 - protein coding gene tektin 5
Gm41419 16 10371350 to 10378934 7584 + lncRNA gene predicted gene, 41419
Tssr139919 16 10384063 to 10384092 29 - TSS region transcription start site region 139919
Cpgi7950 16 10394900 to 10395393 493 CpG island CpG island 7950
Tssr139920 16 10395268 to 10395339 71 - TSS region transcription start site region 139920
Tssr139921 16 10395438 to 10395460 22 - TSS region transcription start site region 139921
Tssr139922 16 10395476 to 10395483 7 - TSS region transcription start site region 139922
Cpgi7951 16 10411783 to 10412314 531 CpG island CpG island 7951
Tssr137023 16 10411928 to 10411965 37 + TSS region transcription start site region 137023
Nubp1 16 10411948 to 10424428 12480 + protein coding gene nucleotide binding protein 1
Tvp23a 16 10420557 to 10447362 26805 - protein coding gene trans-golgi network vesicle protein 23A
Tssr139923 16 10447319 to 10447331 12 - TSS region transcription start site region 139923
Tssr139924 16 10447340 to 10447369 29 - TSS region transcription start site region 139924
Tssr139925 16 10447371 to 10447389 18 - TSS region transcription start site region 139925
Tssr137024 16 10447412 to 10447450 38 + TSS region transcription start site region 137024
Tssr137025 16 10452813 to 10452838 25 + TSS region transcription start site region 137025
Gm41420 16 10470794 to 10473103 2309 + lncRNA gene predicted gene, 41420
Tssr137026 16 10479921 to 10479940 19 + TSS region transcription start site region 137026
Ciita 16 10480059 to 10528418 48359 + protein coding gene class II transactivator
Tssr137027 16 10480065 to 10480080 15 + TSS region transcription start site region 137027
Tssr137028 16 10480120 to 10480121 1 + TSS region transcription start site region 137028
Tssr137029 16 10480131 to 10480134 3 + TSS region transcription start site region 137029
Tssr137030 16 10480148 to 10480153 5 + TSS region transcription start site region 137030
Tssr137031 16 10484138 to 10484166 28 + TSS region transcription start site region 137031
Tssr137032 16 10488175 to 10488204 29 + TSS region transcription start site region 137032
Tssr137033 16 10488213 to 10488253 40 + TSS region transcription start site region 137033
Tssr137034 16 10489728 to 10489757 29 + TSS region transcription start site region 137034
Tssr137035 16 10489759 to 10489804 45 + TSS region transcription start site region 137035
Tssr137036 16 10489806 to 10489827 21 + TSS region transcription start site region 137036
Dexi 16 10502531 to 10543054 40523 - protein coding gene dexamethasone-induced transcript
Cpgi7952 16 10511051 to 10511294 243 CpG island CpG island 7952