Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:99872167-100073287

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lima1 15 99778470 to 99875456 96986 - protein coding gene LIM domain and actin binding 1
Cpgi7726 15 99875065 to 99875735 670 CpG island CpG island 7726
Tssr136404 15 99875382 to 99875447 65 - TSS region transcription start site region 136404
Gm49494 15 99875540 to 99877595 2055 + unclassified non-coding RNA gene predicted gene, 49494
Tssr133073 15 99875564 to 99875621 57 + TSS region transcription start site region 133073
Gm18095 15 99880199 to 99880803 604 + pseudogene predicted gene, 18095
Gm18890 15 99883632 to 99884430 798 + pseudogene predicted gene, 18890
Uqcrh-ps1 15 99898289 to 99898556 267 - pseudogene ubiquinol-cytochrome c reductase hinge protein, pseudogene 1
Tssr133074 15 99902936 to 99902957 21 + TSS region transcription start site region 133074
Gm49495 15 99902963 to 99904276 1313 + unclassified gene predicted gene, 49495
1700121M21Rik 15 99914369 to 99920299 5930 + lncRNA gene RIKEN cDNA 1700121M21 gene
Gm20564 15 99915428 to 99915900 472 - pseudogene predicted gene, 20564
Tssr136405 15 99915934 to 99915938 4 - TSS region transcription start site region 136405
Fam186a 15 99918348 to 99931658 13310 - protein coding gene family with sequence similarity 186, member A
Cpgi7727 15 99931528 to 99931740 212 CpG island CpG island 7727
Tssr136406 15 99931645 to 99931673 28 - TSS region transcription start site region 136406
Tssr133075 15 99931679 to 99931695 16 + TSS region transcription start site region 133075
Gm21917 15 99931711 to 99953044 21333 + antisense lncRNA gene predicted gene, 21917
Tssr136407 15 99931784 to 99931803 19 - TSS region transcription start site region 136407
Gm23133 15 99937307 to 99937441 134 - snRNA gene predicted gene, 23133
Tssr136408 15 99967055 to 99967066 11 - TSS region transcription start site region 136408
Tssr136409 15 99967067 to 99967077 10 - TSS region transcription start site region 136409
Tssr136410 15 99967081 to 99967087 6 - TSS region transcription start site region 136410
2310068J16Rik 15 99972167 to 99973287 1120 - antisense lncRNA gene RIKEN cDNA 2310068J16 gene
Cpgi7728 15 99972502 to 99973851 1349 CpG island CpG island 7728
Tssr136411 15 99972714 to 99972738 24 - TSS region transcription start site region 136411
Tssr133076 15 99972810 to 99972821 11 + TSS region transcription start site region 133076
Tssr133077 15 99972834 to 99972896 62 + TSS region transcription start site region 133077
Tssr133078 15 99972906 to 99972925 19 + TSS region transcription start site region 133078
Tssr133079 15 100005145 to 100005160 15 + TSS region transcription start site region 133079
Larp4 15 100016358 to 99970065 -46293 + protein coding gene La ribonucleoprotein domain family, member 4
Cpgi7729 15 100038260 to 100039436 1176 CpG island CpG island 7729
Tssr133080 15 100038635 to 100038669 34 + TSS region transcription start site region 133080
Dip2b 15 100038664 to 100219473 180809 + protein coding gene disco interacting protein 2 homolog B
Tssr133081 15 100038674 to 100038721 47 + TSS region transcription start site region 133081
Tssr133082 15 100038747 to 100038808 61 + TSS region transcription start site region 133082
Tssr136412 15 100041397 to 100041412 15 - TSS region transcription start site region 136412
Tssr133083 15 100060245 to 100060258 13 + TSS region transcription start site region 133083
Tssr4715 15 100063608 to 100063614 6 + TSS region transcription start site region 4715
Tssr133084 15 100067501 to 100067513 12 + TSS region transcription start site region 133084