Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:99820428-100010900

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lima1 15 99778470 to 99875456 96986 - protein coding gene LIM domain and actin binding 1
Gm17057 15 99819020 to 99834570 15550 + antisense lncRNA gene predicted gene 17057
Tssr136402 15 99821048 to 99821078 30 - TSS region transcription start site region 136402
Tssr133072 15 99821130 to 99821170 40 + TSS region transcription start site region 133072
Tssr136403 15 99853689 to 99853694 5 - TSS region transcription start site region 136403
Cpgi7725 15 99865446 to 99865700 254 CpG island CpG island 7725
Cpgi7726 15 99875065 to 99875735 670 CpG island CpG island 7726
Tssr136404 15 99875382 to 99875447 65 - TSS region transcription start site region 136404
Gm49494 15 99875540 to 99877595 2055 + unclassified non-coding RNA gene predicted gene, 49494
Tssr133073 15 99875564 to 99875621 57 + TSS region transcription start site region 133073
Gm18095 15 99880199 to 99880803 604 + pseudogene predicted gene, 18095
Gm18890 15 99883632 to 99884430 798 + pseudogene predicted gene, 18890
Uqcrh-ps1 15 99898289 to 99898556 267 - pseudogene ubiquinol-cytochrome c reductase hinge protein, pseudogene 1
Tssr133074 15 99902936 to 99902957 21 + TSS region transcription start site region 133074
Gm49495 15 99902963 to 99904276 1313 + unclassified gene predicted gene, 49495
1700121M21Rik 15 99914369 to 99920299 5930 + lncRNA gene RIKEN cDNA 1700121M21 gene
Gm20564 15 99915428 to 99915900 472 - pseudogene predicted gene, 20564
Tssr136405 15 99915934 to 99915938 4 - TSS region transcription start site region 136405
Fam186a 15 99918348 to 99931658 13310 - protein coding gene family with sequence similarity 186, member A
Cpgi7727 15 99931528 to 99931740 212 CpG island CpG island 7727
Tssr136406 15 99931645 to 99931673 28 - TSS region transcription start site region 136406
Tssr133075 15 99931679 to 99931695 16 + TSS region transcription start site region 133075
Gm21917 15 99931711 to 99953044 21333 + antisense lncRNA gene predicted gene, 21917
Tssr136407 15 99931784 to 99931803 19 - TSS region transcription start site region 136407
Gm23133 15 99937307 to 99937441 134 - snRNA gene predicted gene, 23133
Tssr136408 15 99967055 to 99967066 11 - TSS region transcription start site region 136408
Tssr136409 15 99967067 to 99967077 10 - TSS region transcription start site region 136409
Tssr136410 15 99967081 to 99967087 6 - TSS region transcription start site region 136410
2310068J16Rik 15 99972167 to 99973287 1120 - antisense lncRNA gene RIKEN cDNA 2310068J16 gene
Cpgi7728 15 99972502 to 99973851 1349 CpG island CpG island 7728
Tssr136411 15 99972714 to 99972738 24 - TSS region transcription start site region 136411
Tssr133076 15 99972810 to 99972821 11 + TSS region transcription start site region 133076
Tssr133077 15 99972834 to 99972896 62 + TSS region transcription start site region 133077
Tssr133078 15 99972906 to 99972925 19 + TSS region transcription start site region 133078
Tssr133079 15 100005145 to 100005160 15 + TSS region transcription start site region 133079
Larp4 15 100016358 to 99970065 -46293 + protein coding gene La ribonucleoprotein domain family, member 4