Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:99398142-99518156

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmbim6 15 99392947 to 99410049 17102 + protein coding gene transmembrane BAX inhibitor motif containing 6
Tssr133020 15 99399769 to 99399803 34 + TSS region transcription start site region 133020
Tssr133021 15 99401811 to 99401826 15 + TSS region transcription start site region 133021
Tssr133022 15 99402121 to 99402143 22 + TSS region transcription start site region 133022
Tssr133023 15 99404409 to 99404434 25 + TSS region transcription start site region 133023
Tssr133024 15 99405849 to 99405877 28 + TSS region transcription start site region 133024
Tssr133025 15 99405898 to 99405929 31 + TSS region transcription start site region 133025
Tssr133026 15 99406146 to 99406157 11 + TSS region transcription start site region 133026
Tssr133027 15 99406191 to 99406200 9 + TSS region transcription start site region 133027
Tssr133028 15 99406568 to 99406631 63 + TSS region transcription start site region 133028
Tssr136359 15 99406655 to 99406678 23 - TSS region transcription start site region 136359
Tssr133029 15 99408528 to 99408553 25 + TSS region transcription start site region 133029
Tssr133030 15 99408699 to 99408714 15 + TSS region transcription start site region 133030
Gm49483 15 99413474 to 99413693 219 + pseudogene predicted gene, 49483
Nckap5l 15 99422035 to 99457748 35713 - protein coding gene NCK-associated protein 5-like
Tssr136360 15 99424534 to 99424549 15 - TSS region transcription start site region 136360
Cpgi7707 15 99425682 to 99425975 293 CpG island CpG island 7707
Nckap5los 15 99432831 to 99435252 2421 + antisense lncRNA gene NCK-associated protein 5-like, opposite strand
Tssr136361 15 99435649 to 99435652 3 - TSS region transcription start site region 136361
Cpgi7708 15 99457020 to 99458220 1200 CpG island CpG island 7708
Tssr136362 15 99457720 to 99457736 16 - TSS region transcription start site region 136362
Tssr136363 15 99457742 to 99457753 11 - TSS region transcription start site region 136363
Tssr136364 15 99457758 to 99457777 19 - TSS region transcription start site region 136364
Gm49484 15 99457934 to 99465328 7394 - unclassified non-coding RNA gene predicted gene, 49484
Tssr133031 15 99457943 to 99457972 29 + TSS region transcription start site region 133031
Tssr136365 15 99458117 to 99458128 11 - TSS region transcription start site region 136365
Tssr136366 15 99458142 to 99458156 14 - TSS region transcription start site region 136366
Bcdin3d 15 99470084 to 99474730 4646 - protein coding gene BCDIN3 domain containing
Cpgi7709 15 99470246 to 99470810 564 CpG island CpG island 7709
Cpgi7710 15 99474187 to 99474870 683 CpG island CpG island 7710
Tssr136367 15 99474696 to 99474735 39 - TSS region transcription start site region 136367
Gm49485 15 99491824 to 99492224 400 - pseudogene predicted gene, 49485
Faim2 15 99497012 to 99528165 31153 - protein coding gene Fas apoptotic inhibitory molecule 2
Tssr136368 15 99497888 to 99497917 29 - TSS region transcription start site region 136368
Tssr136369 15 99499498 to 99499511 13 - TSS region transcription start site region 136369
Tssr136370 15 99500125 to 99500148 23 - TSS region transcription start site region 136370