Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:99245087-99367018

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cal5 15 94974879 to 99363692 4388813 heritable phenotypic marker caracul like 5
Mcrs1 15 99242817 to 99251961 9144 - protein coding gene microspherule protein 1
Tssr136351 15 99248934 to 99248947 13 - TSS region transcription start site region 136351
Tssr136352 15 99248952 to 99248972 20 - TSS region transcription start site region 136352
Tssr133006 15 99249242 to 99249259 17 + TSS region transcription start site region 133006
Tssr133007 15 99249468 to 99249504 36 + TSS region transcription start site region 133007
Gm34338 15 99249506 to 99284416 34910 + lncRNA gene predicted gene, 34338
Tssr133008 15 99249589 to 99249608 19 + TSS region transcription start site region 133008
Cpgi7701 15 99251662 to 99252716 1054 CpG island CpG island 7701
1700120C14Rik 15 99251788 to 99262041 10253 + lncRNA gene RIKEN cDNA 1700120C14 gene
Tssr136353 15 99251913 to 99251924 11 - TSS region transcription start site region 136353
Tssr136354 15 99251929 to 99251968 39 - TSS region transcription start site region 136354
Gm34447 15 99252010 to 99252883 873 + lncRNA gene predicted gene, 34447
Gm49458 15 99254525 to 99254835 310 - pseudogene predicted gene, 49458
Gm25999 15 99254882 to 99255014 132 - snoRNA gene predicted gene, 25999
Fam186b 15 99271018 to 99295885 24867 - protein coding gene family with sequence similarity 186, member B
Tssr133009 15 99276280 to 99276290 10 + TSS region transcription start site region 133009
Tssr136355 15 99287174 to 99287185 11 - TSS region transcription start site region 136355
Tssr136356 15 99287198 to 99287201 3 - TSS region transcription start site region 136356
Cpgi7702 15 99294481 to 99295691 1210 CpG island CpG island 7702
Prpf40b 15 99295087 to 99317018 21931 + protein coding gene pre-mRNA processing factor 40B
Tssr133010 15 99295211 to 99295279 68 + TSS region transcription start site region 133010
Fmnl3 15 99317225 to 99370482 53257 - protein coding gene formin-like 3
Gm49478 15 99348821 to 99349535 714 - pseudogene predicted gene, 49478
D15Mit263 15 99363421 to 99363692 271 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 263
Shar 15 102988123 to 99363421 -3624702 heritable phenotypic marker shiny and rough