Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:99035006-99115022

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tuba1c 15 99029891 to 99038105 8214 + protein coding gene tubulin, alpha 1C
Cpgi7689 15 99040106 to 99040370 264 CpG island CpG island 7689
Gm41399 15 99041236 to 99051157 9921 + lncRNA gene predicted gene, 41399
D15Jcs28 15 99047824 to 99048119 295 DNA segment DNA segment, Chr 15, John C. Schimenti 28
Cpgi7690 15 99054932 to 99057518 2586 CpG island CpG island 7690
Tssr132988 15 99055164 to 99055183 19 + TSS region transcription start site region 132988
Prph 15 99055174 to 99058978 3804 + protein coding gene peripherin
Tssr132989 15 99055895 to 99055916 21 + TSS region transcription start site region 132989
D15Mit42 15 99056585 to 99056770 185 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 42
Gm34284 15 99068138 to 99074669 6531 - antisense lncRNA gene predicted gene, 34284
Cpgi7691 15 99074529 to 99075231 702 CpG island CpG island 7691
Tssr132990 15 99074968 to 99075005 37 + TSS region transcription start site region 132990
Troap 15 99074973 to 99083409 8436 + protein coding gene trophinin associated protein
Tssr132991 15 99075006 to 99075022 16 + TSS region transcription start site region 132991
Mir6960 15 99080805 to 99080865 60 + miRNA gene microRNA 6960
C1ql4 15 99084086 to 99087817 3731 - protein coding gene complement component 1, q subcomponent-like 4
Cpgi7692 15 99084618 to 99084935 317 CpG island CpG island 7692
Cpgi7693 15 99087093 to 99088622 1529 CpG island CpG island 7693
Tssr136348 15 99088426 to 99088429 3 - TSS region transcription start site region 136348
Cpgi7694 15 99093232 to 99094228 996 CpG island CpG island 7694
Cpgi7695 15 99094821 to 99095274 453 CpG island CpG island 7695
Cpgi7696 15 99096421 to 99098729 2308 CpG island CpG island 7696
Tssr136349 15 99096860 to 99096861 1 - TSS region transcription start site region 136349
Cpgi7697 15 99099110 to 99099415 305 CpG island CpG island 7697
Dnajc22 15 99099134 to 99104737 5603 + protein coding gene DnaJ heat shock protein family (Hsp40) member C22
Tssr132992 15 99099451 to 99099482 31 + TSS region transcription start site region 132992
Tssr132993 15 99099487 to 99099524 37 + TSS region transcription start site region 132993